Trichomycterus rosablanca: 134314266
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Entry
134314266 CDS
T09921
Symbol
srfb
Name
(RefSeq) serum response factor b isoform X1
KO
K04378
serum response factor
Organism
trn
Trichomycterus rosablanca
Pathway
trn04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134314266 (srfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134314266 (srfb)
Transcription factors [BR:
trn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box responders to external signals
134314266 (srfb)
BRITE hierarchy
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
134314266
NCBI-ProteinID:
XP_062850896
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Position
5:complement(9213497..9248345)
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AA seq
600 aa
AA seq
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MNRMLSSPTGSALSGNGSASSTGAAHGSVVLSGGLRASHFPCAPARLGESAGMLTGSGPG
VASRQGVRPGNGSGLSALQAAAQPGMVAAGLGAMTGRYDRDKESGAPQVCSASDADSESG
DDDEPTGSAANSRRGVKRERAEIEGAGIGHEAGGPPGGFGVLSGGVAGAKPGKKTRGRVK
IKMEFIDNKLRRYTTFSKRKTGIMKKAYELSTLTGTQVLLLVASETGHVYTFATRKLQPM
ITSETGKALIQTCLNSPDSPPRSDPSTDQRMSATGFEETDLTYQVSESESLGETKDTLKP
AFTVASLPGNTSAQATVPTTSTTMQVSSGASFPITNYLAPVSGSSSSASGNTIASTNGTV
LKSAAASGGVMQLPSGFTFMSAGTHFPPGTSTIPLGQLQQHSLALQGQQGQTLSSATATQ
TAQCQQAVFRLPTAVSLTGAGMAQQLQAIQVHQSAHSSAISTDGSSAEISQSNTASTATV
SLPATIVTSSVPTSVAGHMMYSSPHAVMYAPGPTLAEGGLAVLNAFSQGASAMQVSHAQA
PDTGAVPQVFLTGPPGTVQIPVSAVQLHSMVIGQQSNSNNSNLTELQVVNLDTTQIAKSD
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaataggatgttatctagcccgactgggtcggcactgagcggaaacggatcggcgagt
tcgaccggcgcggctcacggctctgtggtgctcagcggcgggctgcgtgcgtctcatttc
ccttgcgcaccggcacgcttaggagaaagcgcgggcatgcttacaggcagcgggcctggt
gtcgcttccagacagggagtcagacctgggaacggtagcgggctgagcgccctgcaggcc
gccgcacagcccggcatggtggcagcaggactcggggcaatgaccggcaggtatgaccgg
gacaaagagagcggcgcgccgcaagtttgcagtgcctccgatgccgactccgaatcaggg
gacgacgacgaacccaccggttctgcggcaaacagcaggcgcggagtgaagcgagaaaga
gccgagattgagggcgcaggaatcggtcatgaggctggcgggcctcctgggggattcggg
gtgctgagcggcggggtggccggggcaaaaccgggtaagaaaacccgagggcgagtgaag
ataaagatggagttcatagacaacaagttgcggcggtacaccaccttcagcaagaggaag
actggtatcatgaagaaggcatatgaactctccacactgacaggcacccaagtgctgctc
ctggtggcaagcgaaacaggccatgtgtacacatttgccacacgcaagctccagcccatg
atcaccagcgagacgggcaaggctctgatccagacgtgcctgaactctccagactcacct
ccccgctccgacccatccacggaccagcggatgagcgccacgggtttcgaggagacagac
ctcacctaccaggtgtctgaatccgaaagcctaggagaaaccaaggacactttgaagcca
gcctttactgtggccagtctgccaggcaataccagtgcccaggccacagtgcctaccacc
tccaccactatgcaggtcagcagcggggcttccttccccatcaccaactacctggcacca
gtctctggcagtagcagcagtgccagcggcaacactatagccagcaccaacgggactgtt
ctgaagagtgcagctgcctctggaggcgttatgcagctgcccagcggctttaccttcatg
tcagcaggcactcattttccccctggaacctctaccatccccctgggtcaactgcaacag
cactctctggctttacagggtcagcagggccagaccctcagcagtgctacggctacacag
acagcacagtgtcagcaggctgtgtttcgcctccccactgctgtctctctcacaggagca
ggcatggcccagcagcttcaggccatccaggttcatcaaagcgctcattccagtgccatc
agcactgacggcagcagtgccgagatctctcagtccaacactgcctccacagccacagtc
agtctcccagctactatcgtcacgtcatcagtgccaacctctgtagcaggtcacatgatg
tactccagcccccacgcggtcatgtacgcccccggacccacacttgccgagggtggccta
gctgtgcttaacgccttttcccagggtgcatcggcaatgcaggtgtcccacgcacaggcc
ccagatactggtgctgttcctcaggtgttcctcacagggccccctggcacggtccagatt
cctgtttcagctgtgcaactacattcaatggtgattggtcagcagtccaacagcaacaac
agtaatctgacggagcttcaggtggtgaatctggacacaacgcagattgctaagagtgac
tga
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