Trichomycterus rosablanca: 134314456
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Entry
134314456 CDS
T09921
Symbol
six2a
Name
(RefSeq) homeobox protein SIX2a
KO
K19472
homeobox protein SIX2
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134314456 (six2a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain SINE
134314456 (six2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIX1_SD
Homeobox_KN
Homeodomain
HTH_3
YdaS_toxin
HTH_72
Phage_mat-A
Motif
Other DBs
NCBI-GeneID:
134314456
NCBI-ProteinID:
XP_062851125
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All DBs
Position
5:31627494..31630643
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AA seq
298 aa
AA seq
DB search
MSMLPTFGFTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHR
GNFRELYKILESHQFSPHNHPKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRS
IWDGEETSYCFKEKSRSVLREWYTHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR
AAEAKERENNENSNTNNHNALTSSVNGNKTMLGSSDEDKTPGGTPDHTSSSPALLLNAAS
GLPPLHGLSAPPAPSAVPVPTAESLHHQHQHHHHHHHHHGLHDNILNPMASSLVDLGS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatgcttcccactttcggctttacgcaagagcaagttgcgtgcgtgtgtgaagtc
ctgcagcagggcggcaacatcgagcgcctcggccgctttctgtggtccctgcctgcctgt
gagcacctccacaaaaacgagagcgtgctcaaagccaaggccgtggtcgccttccaccgg
ggaaacttcagagaactctataagatcctcgagagccaccagttttcgccacacaaccac
ccgaagcttcagcagctgtggctcaaggcacactacatcgaggcggagaagctgcgcggc
cggccgcttggcgccgtgggcaaatatcgggtgcgcaggaagtttccgcttccccgttcc
atctgggacggcgaggagaccagctactgctttaaggagaagagtcgcagcgtgttgagg
gaatggtacacccataacccttatccttcaccgcgggaaaaacgcgagctggctgaagct
actggcctgaccacaactcaggtcagcaactggtttaaaaacagacggcaacgcgaccgc
gcggcggaggccaaagaaagagagaacaacgaaaactcgaacacgaacaaccacaacgcg
cttacgtcctccgtgaatggaaacaagacaatgttgggtagttcggacgaggacaaaact
ccaggcgggactccggatcacacatcgtcaagcccagcgctgctgctaaatgcagcctct
ggtctgccgccccttcacggtctgtcagctccacccgcgcccagcgcagtacccgtgcca
accgcagagtctctgcaccaccaacaccaacaccaccaccaccaccaccaccaccacggc
ctgcacgacaacatactgaatcctatggcttccagcttggtcgatctaggctcttaa
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