| Entry |
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| Name |
(RefSeq) collagen alpha-1(XIII) chain-like
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| KO |
| K16617 | collagen type XIII alpha |
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| Organism |
trn Trichomycterus rosablanca
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| Brite |
KEGG Orthology (KO) [BR:trn00001]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:trn00536]
134314536
Glycosaminoglycan binding proteins [BR:trn00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
134314536
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
5:37888857..37947636
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| AA seq |
519 aa
MGIPGRMGIKGNTGDKGAPGEPGLSIIGPRGPPGQPGTRGFPGFPGPIGLDGKSGLNGQK
GDMGTPGPKGPPGEPGPKGEKGVCGDYTHRMLPITVRNMPSISPLILKRLKQGEAGAQGP
PGPPGPPGSPGLTGASGPPGKPGEPGKPGKDIRMLPGIKGEPGVPGQKGETGLTGPGGPK
GSKGEQGHQGEPSSLGLSMKGEPGTPGLPGSKGEKGDQGIKGEAGPEGTLGPRGPPGPTG
EPGKMLTSDNENDIRNVHLMGPPGLPGPPGPAGIPGTKGGVGLPGPPSLDGEKGPRGKAG
EPGAVGLPGPEGPRGEGGVMGHPGPKGDRGAMGPSGSPGLDGPTGEKGVAGPPGPIGLPG
AMGQKGEPGENGEKAELVNGPSGPPGPAGPVGPAGPPGLLGPKGEPGVGVRGEKGSFGQK
GDKGDRGHLGLPGLIGPPGIPGPAGPKGERGEKGDMGIAGPTGPHGNPGLVGPPGIKGNR
GFRGFKGEKGEPGLPGLDGLDAPCAVGDDGLPVPGCWNK |
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| NT seq |
1560 nt +upstreamnt +downstreamnt
atgggcattcctggaagaatgggcataaagggaaacacaggggacaagggagcaccaggg
gagccaggtctgtctatcattggcccacgaggacctcctggtcagcctggcactagagga
tttcctggctttccgggtcctatcggcttggacggcaaatctgggctgaatggtcagaaa
ggagacatgggcactcctggccccaagggacctcctggtgaacctggtccaaaaggcgaa
aagggagtgtgtggtgattatacacatcggatgttacccatcaccgtacgcaacatgccc
tcaataagccctctaattctaaagcgcctaaagcagggtgaggctggagcacaaggacca
ccgggcccgcctggccccccagggtctcctggcctgaccggtgctagtgggccaccggga
aaacctggagaacctgggaaacctggtaaagatataaggatgttgccaggaattaagggg
gaaccaggtgtacctggacaaaagggtgaaacaggcctaacaggacctggagggcccaag
ggatctaaaggtgaacaaggacatcagggtgaaccaagctccttaggattatccatgaaa
ggagaaccaggaacaccaggactgccgggatccaagggtgaaaaaggtgaccaaggcatt
aagggtgaagcaggacctgagggcacccttggaccaagaggtcctccaggtccaacagga
gaaccaggaaaaatgttaaccagcgacaatgaaaatgatattcgtaatgtgcatctaatg
ggtccacctggtctacctggtccaccagggcctgctggaatacctggcactaagggaggg
gttggactgcctggccctcctagtcttgatggtgaaaagggccctagaggaaaagcagga
gaacctggagctgtgggccttcctggacctgaagggccacgaggagagggaggagtaatg
ggccaccctggtcctaaaggagatagaggagccatgggtccctcaggatcacctggttta
gatggccctactggtgaaaaaggggttgcagggcctcctggcccgattggattaccaggt
gctatgggtcagaaaggtgaacctggagaaaatggtgaaaaagcagagctggtaaatggg
ccttcaggacctccagggccagcagggccagttgggccagcgggacctccaggattgtta
gggccaaagggggagccaggtgtgggtgtaagaggagaaaagggatcatttggacagaaa
ggagataaaggagataggggtcatcttggactccctggtctcatagggccacctggtata
cctggaccagcaggaccaaaaggagaaaggggggagaaaggagatatgggcatagcagga
ccaacagggcctcatggcaaccctgggttagtaggaccaccaggaataaaaggaaatcgg
ggtttccgaggctttaaaggggagaaaggtgaaccaggcttgccaggcctggacggtctg
gatgccccttgtgctgtgggtgatgatggtctaccagtaccagggtgctggaataaatga |
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