Trichomycterus rosablanca: 134314544
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Entry
134314544 CDS
T09921
Symbol
hps1
Name
(RefSeq) Hermansky-Pudlak syndrome 1 protein isoform X1
KO
K20193
Hermansky-Pudlak syndrome 1 protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134314544 (hps1)
Membrane trafficking [BR:
trn04131
]
Endosome - Lysosome transport
Others
BLOC-3 complex
134314544 (hps1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fuz_longin_1
Fuz_longin_2
Fuz_longin_3
DUF1281
Motif
Other DBs
NCBI-GeneID:
134314544
NCBI-ProteinID:
XP_062851244
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All DBs
Position
5:complement(39322569..39371648)
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AA seq
672 aa
AA seq
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MKCLLVATESAEVLFFWTDPEFEQHIKEQYETPQEEGGRPPAFEDSINTLFAPIIISCST
MVDRLGEGYTSFSTENGHVYALHQFDECLYIAVNGDGEESDEDLKRKVFVMKKLTEILFG
MVMLSSSLLRKELRPHDMEQRNRVWKKLQGLLETYSRLREQDQSFLVEAVERLIHPMLCE
QCIEFLERKLVQQINSSAERAGEEVLHAFILVHTKLLAFYSSRNASTLSTSDLLSLIIIV
QDLYPSSLELEDTSTEELESTSAPDIFYTPEPSPIEKDSGHLSSDSPPVFQFVDPDIQMA
EDSLQTLQVPAPDPMTPTRVFLEAASKEGFHPMMPHSMYCLPLWPGITLVLLTKIPNSQV
AMSVYVLLEAFVKLEKRLSEGLDGPGGLRAQPSIQELRNKMEKFLKVLASMDIQAPQLHN
AWTEFKNKAVTRSGQGIKVLVLLCRNMKTQLCSLYRQCFAAECMGSTQRLSPTLQERVLN
MVQEKLIDWKDFLLVKSKRNTTMVSYLDDFPGLVHFIYVDRTTGQMIAPSLSVTDSAATE
LGSGPIAHFIKNKVWSLVATTRRFLQKGYSTVTLRDGDYYFCYFLWFENETGYKLEVVDI
PKLPDDLGPIGMLAWDYYRKLLRYYSKNHQNEVVKCYELLTVHLGVIPPEYILQHCSQLA
RKLWEPTRIPLL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgccttctggtggccacagaaagtgccgaagtccttttcttctggactgatcct
gaatttgagcagcacattaaagaacaatatgaaacaccacaagaggagggtggaaggcca
ccagcctttgaggatagcatcaacacattgtttgccccaattatcatctcctgtagcacc
atggttgaccgtctgggtgagggctacacctctttcagcacagagaatggtcacgtctat
gctctacatcagtttgatgaatgtctgtatatagctgtgaatggagacggtgaggagagt
gatgaggatctgaagagaaaagtttttgtgatgaagaaacttacagagatcttgtttggc
atggtgatgctcagcagctctctcttgaggaaagaattgcgccctcacgacatggagcag
aggaaccgtgtatggaagaaactgcagggacttcttgaaacgtacagccgcttgagagaa
caggatcaaagctttttagtggaggctgtggagaggttgatccacccgatgctgtgtgaa
caatgcattgagtttctggagcggaaactggtgcagcagatcaacagcagtgctgaaaga
gcaggagaggaggtgctgcatgctttcatcctggtgcacaccaaacttttggctttctat
tccagccgtaatgccagcacgctgagtacttcagaccttctgtccctgatcatcattgtg
caggatctttatcctagcagcctcgagcttgaagacacatctactgaggagctggaaagt
acttcagcgcctgacattttctacactccagaaccttcaccaattgaaaaagactctggc
catcttagcagtgacagtcctcctgtcttccagtttgtggatcctgacattcagatggca
gaggacagtctgcaaactcttcaggtgccggctcctgaccctatgaccccaactagagta
ttcctagaagcagcatctaaggagggctttcatcccatgatgcctcactccatgtactgt
ttacccttatggcctggtattaccctggtgctgctgactaagatccctaacagccaggtg
gccatgtctgtgtatgtgttactggaggcttttgttaagctggaaaagaggctgagtgaa
ggactggacgggccggggggcttgcgcgctcaaccttcaatccaagagctccgcaacaaa
atggagaagttcctcaaagtactggctagcatggacatccaggcccctcaacttcacaac
gcctggacagaatttaagaacaaggctgttacccgatcaggacagggcatcaaagtcttg
gtgctcctgtgtcgaaacatgaagactcagctgtgcagtttgtatcgacagtgttttgca
gctgagtgtatgggaagtacccagcgtctctcccccacgctccaagaacgagtgctgaac
atggtgcaagaaaagctgatcgactggaaggactttctgctggttaagagcaagagaaat
acaactatggtctcatacttagatgactttcctggtcttgtgcattttatttacgtggat
cgtaccacaggacaaatgattgctccatctctcagtgtgactgacagtgctgctacagag
cttggaagcggtccaatcgctcactttataaaaaacaaggtgtggagtctggttgcaacg
acgaggcgttttttgcagaaaggctatagcactgtgacgttacgagatggagactactac
ttctgctacttcctctggtttgagaatgagacagggtacaagctggaggtggttgatatc
cctaaacttcctgatgacttgggtcctataggaatgcttgcctgggattattacaggaag
ctgctgcgctactacagtaaaaatcaccagaatgaggtggtgaagtgttacgagctgctg
accgtgcacctgggcgtgatccctcctgagtacatcctgcagcactgcagccagctggcc
cgcaagctgtgggagccaacacgcattcctctcttatga
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