Trichomycterus rosablanca: 134314586
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Entry
134314586 CDS
T09921
Symbol
pax2a
Name
(RefSeq) paired box protein Pax-2a isoform X1
KO
K15608
paired box protein 2
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134314586 (pax2a)
04131 Membrane trafficking [BR:
trn04131
]
134314586 (pax2a)
03036 Chromosome and associated proteins [BR:
trn03036
]
134314586 (pax2a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
134314586 (pax2a)
Membrane trafficking [BR:
trn04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
134314586 (pax2a)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
134314586 (pax2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAX
Pax2_C
HTH_23
HTH_32
Homeodomain
DUF6115
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
134314586
NCBI-ProteinID:
XP_062851309
LinkDB
All DBs
Position
5:complement(42106005..42139625)
Genome browser
AA seq
403 aa
AA seq
DB search
MDIHCKADPFTAMHRHGGVNQLGGVFVNGRPLPDVVRQRIVELAHQGVRPCDISRQLRVS
HGCVSKILGRYYETGSIKPGVIGGSKPKVATPKVVDKIADYKRQNPTMFAWEIRDRLLAE
GVCDNDTVPSVSSINRIIRTKVQQPFHPSPDGTGTTLTTGHTIVPSTASPPVSSASNDPV
GSYSINGILGIPRSNGEKRKRDDVLWSGNHLDGKKIGYYGSDGPNSDSQGSVESLRKHLR
ADAFTQQQLEALDRVFERPSYPDVFPTSEHIKPEQANEYALPALNPGLDEVKPSLSTSAS
SDLGSSVSQSYPVVTGRDMASTTLPGYPPHVPPTGQGSYPTSTLAGMVPGSDFSGNPYSH
PQYTTYNEAWRFSNPALLSSPYYYSAASRGSAPPTAATAYDRH
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atggatattcactgcaaagcagaccctttcacggccatgcaccggcatgggggggtaaac
cagctcggcggggtgtttgtgaacggcagacccttacctgacgtagttcggcagaggatc
gtggagctggcacaccaaggggtcagaccgtgtgacatctcaagacaacttcgggtcagc
catggttgtgtcagcaaaattctcggcaggtattacgaaaccggcagtattaaacctgga
gttattggcggttccaaaccaaaagtggccactccaaaagttgtggataaaatcgccgat
tataagaggcagaaccccaccatgttcgcctgggagatcagagaccgactgctggctgaa
ggggtctgcgacaacgacacggtcccaagtgtgtcctctatcaacaggataatacggacc
aaagttcagcagcctttccatccatctccagatgggacaggaactacacttaccacagga
cacactatagtacctagcacagcttccccacccgtatcaagtgcttccaatgacccagtg
ggttcctactccatcaatggcatccttggaatccctcgctctaacggcgaaaaaagaaaa
cgtgatgatgttctctggagtggcaaccacttggatgggaagaaaataggatattatggc
tcagatggtccaaacagcgattctcagggcagcgtagagagcttacggaagcacctgagg
gctgatgccttcactcagcagcagctggaggctctagaccgggtgtttgagcgaccgtca
taccccgacgtcttcccaacatcggagcacatcaaaccagaacaggcaaacgaatacgca
ctaccagcactgaacccaggactggacgaggttaagcccagtctgtcgacgagcgccagc
tccgatctgggatccagcgtttcccagagctatccagtagtgacaggtcgagacatggcc
agtacgactctcccaggttaccccccacacgtcccccccactgggcagggcagctatccc
acttcaacacttgctggaatggttcctgggagtgacttttcaggaaacccctactctcat
ccccaatacacaacctacaatgaagcttggaggtttagcaacccagcattattaagttcc
ccttattattatagtgccgcatcacggggctcggcccctcccactgctgccactgcctat
gaccgccactag
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