Trichomycterus rosablanca: 134314775
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Entry
134314775 CDS
T09921
Symbol
recql
Name
(RefSeq) ATP-dependent DNA helicase Q1 isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134314775 (recql)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
134314775 (recql)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
134314775 (recql)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
RQC
ResIII
HRI2_3H
NinF
Motif
Other DBs
NCBI-GeneID:
134314775
NCBI-ProteinID:
XP_062851551
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Position
1:complement(67733105..67749402)
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AA seq
823 aa
AA seq
DB search
MANITDKERARAELDSVDAELELLELQISELLEKQAALTSRKKQLLKSLDGSCDFSQPSG
SGETPKATFSKKDLQHYEESDFSWSKEVEEKLSRVFKLSKFRPLQQAAINLSMSGKDLFL
VMPTGRGKSLCYQLPAICSEGFTLVIAPLVSLMEDQLMYLKSINVPAVTLNASSSKEDSK
YVMAGMVDKNIPFKLLYVTPEKIAKSKLLMSKLEKAYKMGLLDRIAVDEVHCCSQWGHDF
RPDYKLLGILKRQFTSVPLIGLTATATSEVLKDCQKILCVPDAVMLTAPFNRPNLHYEVR
FKVNENITREITGLIKGRFKDQSGIVYVFSQKEAETVSVDLQQSGILAQPYHANMEASDK
TLVHRQWSNNKIQVVVATVAFGMGIDKADVRFVIHYTISKSIENYYQESGRAGRDDGPAY
CIVFYGFADIFRISTMVVMENTGQQKLQNMVAYCQNVDRCRRAVMAVHFDEVWNDEECKQ
MCDVCRHGSDYVTMDITKHAREAVAIVEVATSMDEKMTPLKLCETWLGKGVAKIRKMTAV
TTLSRLEVEAVIVHLLLHGYFSEDFSFTPYTTYFYVKIGRKAALLKKENHSITMKMKRRH
NAPNQAASSVDQSAAGLQKEPIAYLNDVNIDLSRNDKLVKITKDQQNQEKRHSQNVEDNV
LQAPEMIPPAAIEVDVEVSIQKKNCITESNCTSHNIEGHNKDSNEKPVPPKRIQQQFSPP
ASNGISKAGHPKSVLASRPSETSIISAAALEELSDLRSYYNKQLRRINYVSHEQLQDSSH
SSGMLTCITEPLRSLRLPSSTAVTKSARNLWTRVSMRRKLIQR
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggccaacatcactgataaagagagggcccgagcagagctagactctgtagatgcagag
ttggagttacttgagcttcagatctcagagcttctggagaagcaggccgccttaacctcc
aggaaaaaacaattactgaagagcctggatggctcctgtgacttttctcagccatcagga
tctggagaaacccctaaagccacctttagcaaaaaagacctgcaacattatgaagagtca
gacttctcatggtctaaagaggttgaggagaaactctcaagagtgttcaagctttcgaaa
ttccggccacttcagcaagcagccatcaacctcagtatgtcaggaaaagatctttttttg
gtcatgcctactggcagaggcaaaagtttatgttatcagctaccggctatctgctcagaa
ggttttacattggtcattgctccactggtgtccttgatggaggatcaactcatgtatctg
aagtccatcaatgtccctgctgtaacacttaatgcttctagttcaaaggaggattccaag
tatgttatggcaggcatggttgataaaaacattccctttaaactgctgtatgttacccca
gagaagattgctaagagcaagctgctcatgtctaaacttgaaaaggcctataaaatgggt
ctgctcgatcgcattgctgtggatgaagttcactgctgcagtcagtggggtcatgacttc
agaccagattacaagcttctgggcattctcaaacgtcagtttactagtgttccactgatt
ggactgacagctactgcaaccagcgaagttttaaaagactgccagaagattttgtgtgtt
ccagatgcagtcatgcttacagcaccatttaacagacctaatctccactatgaggttaga
tttaaggttaatgaaaatataaccagagaaataacaggactaatcaaaggaagattcaag
gaccaatcaggaattgtgtatgtgttctcccaaaaagaagcagagactgtgtctgtagat
ctgcagcagagtggcatcctggcccagccataccatgcaaacatggaggcctcagataaa
accctggttcaccgccagtggtctaataataaaatccaggtggtcgtggctactgtggca
tttggaatgggcattgacaaagctgatgtgcgatttgtaatccattataccatcagcaag
tccatagagaattactatcaggagagtggacgtgcaggaagagacgatggtccagcatac
tgcatagtgttctatgggtttgcagacatttttagaattagtaccatggttgtgatggag
aatacaggtcagcagaagcttcagaatatggtggcctattgtcagaatgtagacaggtgt
cgtcgtgccgtcatggcagttcattttgatgaagtttggaatgatgaagagtgcaaacag
atgtgtgatgtctgtcgacatggcagtgactatgtcaccatggatatcaccaagcatgca
cgtgaggcagtggcgattgtggaggtggccacgtctatggatgaaaagatgactcctttg
aaactgtgtgagacctggttggggaaaggggttgccaagatccgcaaaatgacagcggtc
acaacattgtcacgtcttgaagtggaggctgttattgtccatcttctattgcatggctac
ttcagtgaagacttcagcttcaccccatacactacatatttttacgtgaaaattggacgc
aaagctgccctgcttaaaaaagaaaaccactctattactatgaagatgaagagaagacat
aatgcacccaaccaagctgcttcaagtgttgaccaatcagctgctgggcttcagaaagaa
ccaatcgcttatttgaacgatgtcaacattgaccttagcaggaatgacaaactagtaaaa
attaccaaggaccaacagaaccaggagaaaagacattcccaaaatgtggaagataatgta
ttacaagcgcctgaaatgattccacctgctgcaattgaggttgatgtggaggtcagtatt
cagaaaaagaactgcatcactgaaagcaattgcacgtctcacaatattgaaggtcataac
aaagactccaatgaaaaacctgttccacctaaaagaatacagcagcagttttcacctcca
gcttcaaacggtatttctaaagctggacatccaaaatcagttctggccagccgtccatca
gagacctctatcatatcagctgcagcccttgaagagctgtccgacctccgcagttactac
aacaagcagttaaggagaataaactacgtttcacacgaacaattgcaggactcttcacac
agttcaggaatgctcacatgcataacggaacccttaagaagtcttcgtctcccatccagt
acagcagtgaccaaaagcgccagaaatttatggacacgtgttagtatgagaagaaaactt
attcagagatga
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