Trichomycterus rosablanca: 134314776
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Entry
134314776 CDS
T09921
Symbol
psip1a
Name
(RefSeq) PC4 and SFRS1 interacting protein 1a isoform X1
KO
K25057
PC4 and SFRS1-interacting protein
Organism
trn
Trichomycterus rosablanca
Pathway
trn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134314776 (psip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134314776 (psip1a)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
134314776 (psip1a)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Med26
Motif
Other DBs
NCBI-GeneID:
134314776
NCBI-ProteinID:
XP_062851547
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All DBs
Position
5:1523318..1547249
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AA seq
504 aa
AA seq
DB search
MARDYKSGDLIFAKMKGYPHWPARIDDVPDGAVKPPTAKFPIFFFGTHETAFLGPKDIFP
YLPNKDKYGKPNKRKGFNEGLWEIENNPKVELTGKKVMMEAVSDKESDGVPEEEEDAGNE
KTQEKKKSHKVAESGGEEEEEEEEDKEEGDEMEVTLEKDLSPKETTEATKAKRGRKKKVE
TEQDSEEEAGVVSPTSSPAGAEAPAPKRRGRKPNAEKLLLQQQQSTHGDAGGEPVRKRKR
ASEDKAKSSEGEEERGAEGRKKKDEGGKSGKKDPEVKRRRNAKEGSSSDSEDEGKRSRKW
MKQPAEEKDGRRKADDTKDSGKEEEKRHEKKAEKKKEVTTDLRLQKLHGEIKISLKIDNP
DVKKCLAALDELSSLQLTTQHLQKHCELIATLKKIRRFKASQDVMDKANMLYNKFKTMFL
VGEGETMISQVINKSIAEQRQFEEVKKGALKRAEQSKDDQSADNKAATEDSSPEEKTTEA
EKENTGDPPASEQDRVMTPTEETA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atggcccgagattacaaatccggagatctgatcttcgctaagatgaaaggttatcctcac
tggcctgcacggatcgacgacgtgccggacggagccgttaagccgcccaccgctaaattc
cccatcttctttttcgggactcacgaaacagcgttcttgggtcccaaagatattttccca
tatttacccaacaaagacaagtacggcaaacccaacaagagaaagggtttcaatgaagga
ttatgggagattgaaaacaatcctaaagtggaactgactggaaaaaaggtgatgatggaa
gccgtctctgataaagaatcagacggcgtcccggaggaggaggaggacgccgggaacgaa
aagacgcaggagaagaagaagtcccataaagtggctgaaagtggtggtgaggaggaggag
gaggaggaggaggataaagaggaaggtgatgaaatggaggtgactttggagaaagatttg
tcaccgaaggaaaccacagaagctacaaaagccaaacgagggaggaagaagaaggttgaa
actgagcaggactcggaagaagaagcaggagtcgtcagtcccacgtccagccctgcaggt
gcagaagcgcccgctccaaaacgacgaggcaggaaacccaatgctgagaagcttctcctg
cagcagcaacagtcgacgcacggagatgcgggtggggaaccggtgcggaagcgtaagaga
gcttccgaagataaagccaagtcctcagaaggagaggaggagcggggagccgaggggagg
aagaaaaaagatgagggtggaaaaagtggaaagaaagacccggaggtcaagaggaggagg
aacgccaaagaggggagctcgtctgattctgaggacgaagggaagcggagccgtaagtgg
atgaagcagcctgctgaagagaaagacgggcgacgcaaagcagacgacacaaaagattca
gggaaggaggaggaaaagagacatgagaagaaagccgagaagaaaaaagaagtgacgact
gatttaaggttgcagaagctgcacggtgagatcaagatctcgctgaagatcgataacccg
gacgtgaagaagtgtctggcagctctggatgaactgagctcgctgcagctcaccacccag
cacctccagaaacactgtgagctcatcgccacactaaagaagatccgccgcttcaaggcc
agtcaggacgtgatggataaagccaacatgctgtataataagtttaagaccatgttcctg
gtgggcgagggcgagacgatgatcagtcaggtcatcaataaatccatagctgagcagcgg
cagttcgaggaggtcaagaagggggcgctgaagagagccgagcagagcaaggatgatcaa
agcgcagataataaagctgcgactgaagattccagccctgaggagaagaccactgaggcc
gagaaggaaaacacaggagaccctccagcctcagagcaggacagagtgatgaccccaaca
gaagaaacagcctga
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