Trichomycterus rosablanca: 134314798
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Entry
134314798 CDS
T09921
Symbol
zswim8
Name
(RefSeq) zinc finger SWIM domain-containing protein 8
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134314798 (zswim8)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
134314798 (zswim8)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TPR_ZSWIM8
ZSWIM4-8_C
SWIM
Motif
Other DBs
NCBI-GeneID:
134314798
NCBI-ProteinID:
XP_062851599
LinkDB
All DBs
Position
5:4246146..4304568
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AA seq
1920 aa
AA seq
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MELMFAEWEDGERFSFEDSDRFEEDSLCSFISEAESLCQNWRGWRKQSAGPNSPTVKIKD
GQVIPLVELSAKQVAFHIPFEVVEKVYPPVPEQLQLRIAYWSFPENEEDIRLYSCLANGS
PDEFQRGEQLYRMRAVKDPLQIGFHLSATVLSPQAGQSKGAYNVAVMFDRCRITSCSCTC
GAGAKWCAHVVALCLFRIHNASAVCLRAPVSESLSRLQRDQLQKFAQYLISELPQQILPT
AQRLLDELLSSQSTAINTVCGAPDPTAGPSASDQSTWYLDESTLSDNIKKTLHKFCGPSP
VVFSDVNSMYLSSTEPPAAAEWACLLRPLRGREPEGIWNLLSIVREMFKRRDSNAAPLLE
ILTEQCLTYEQIIGWWYSVRTSASHSSASGHTGRSNGQTEVAAHACASMCDEMVVLWRLA
VLDPTMSPQRRLELAAQLKQWHLKVIEIVKRGQHRKSLDKLFQGFKPAVESCYFNWEVAY
PLPGITYCSAEKKSATFSWTRTAQLQKGAKAGTSAEALEPGGGAGRGGGSEPGASELKSR
SGSQPAQQEVAVRPKETIASKRKGSGVNAAGMAVRLGGGMSISIDEGAKGTYKSSGSSST
SGKPKLTQSSKGSCGGSNAGGGKHPSAKRRTSSEDSSLEPDMAELSLDDGSSLALGAEAS
NTFDFLPPPPEMLPSPSSLLREPRKYSGGTTKERSFESNRGIHAALPLAAEPPLCFPKDN
PIPVMAAGAEKEMEVEAELEENIGDEDPVEDALPSMSAKASRGNRDGEGGSMAANPGPQI
PEGVAASDDPVGEDDYQAYYLSAASEEGAERGMPDSNLEEEPDIFAGIKPLEQEGQMEVL
FACAEALYAHGYSNEACRLALELARDLLANPPDLKVEQPQTKGKKSKVSTSKQTQVATKT
LSKTAFLLTVLSERQEFHNLAFSTGMFSLELQRPPASTKALEVKLAYQESEVVALLKKIP
LGLVEMTAIRDRAEQLRDGNFCDYRPVLPLMLASFIFDVLCTPVVSPTGSRPPSRNRNNE
MPGDEELGFEAAVAALGMKTTVSEAEHPLLCEGTRREKGDLALALMITYKDDQSKLKKIL
DKLLDRESQTHKPQTLSSFYSSKPATGSQKSPSKHAAHGGGATGGVSKHAAPTAAAGSAS
VQGVAGASGQQGGMTGTGVHGTASGEAVGEGKEQDKTQPSSCEQQNEVSSFKSEGTVPSR
LALGGRGGYGPRCWGSPVRQKKKHTGMASIDSSAPETTSDSSPTLSRRPLRGGWAASSWG
RGQDSDSISSSSSDSLGSSSSSGSRRAGGGARAKSTDTSRYKGRRPECHVPHVPNQPSEA
AAHFYFELAKTVLVKAGGNSSTSIFTQPSASGGHQGPHRNLHLCAFEIGLYALGLHNFVS
PNWLSRTYSSHVSWITGQAMEIGSAALNILVECWDGHLTPPEVASLADRASRARDPNMVR
AAAELALSCLPHAHALNPNEIQRALVQCKEQDNMMLEKACMAVEEAAKGGGVYPEVLFEV
AHQWYWLYEQTIGGVSTGQREGPTRCGANGGAGRRPPEMNCGIMDSSGAIDSAGVAALTA
SVSATAVVPVISVGSTLYQSHTIPGTAIAHTQGLHPYTTIQAHLPTVCTQQYLGHQLQHI
PRPAVFPIAGTAYPQGMHPAFIGAQYPFSVATGPHPPMAATAVTFPGVPVPAMTQIAVHP
YHTAEAALPLSTTVAVAGIHSGSTIQAIQSASLPGLSSQPPSLVSVSFPVEDEQHSHPVS
QQGLHYLHSAYRVGMLALEMLGRRAHNDHPNNFSRNPPYTEDVKWLLSLAARLGVNYVYQ
FCVGAAKGVLSPFVLQEIIMEALQRLNPAHIHAHLRTPAFHQLVQRCQQAYLQYINYRLI
HLTPADYDDFVNIIRSARGAFCLTPVGMMQFNDVLQTLKRGKQTKELWQRISLEMATFSP
NT seq
5763 nt
NT seq
+upstream
nt +downstream
nt
atggaactgatgtttgctgagtgggaagatggagagaggttctcttttgaggactcggac
cgtttcgaggaggactctctgtgctccttcatctcggaggctgagagtctgtgtcagaat
tggagaggatggagaaagcagtcagccggtccgaattcacccactgttaagattaaagat
ggacaggtcatccccttggtggaactgtcagccaagcaagtggcattccatatcccgttt
gaggtggtggagaaagtctatcctccggttcccgagcagcttcagcttcgcatagcctac
tggagctttcctgaaaatgaggaggacatcaggttgtactcctgcttggcgaacggcagt
cctgatgagtttcagcgtggtgagcagctctatcgaatgagagctgtaaaagacccccta
cagataggttttcatctcagtgccacggtcctctcgccccaggccggccagtcgaagggg
gcctacaatgtggcggtcatgttcgaccgttgccgcatcacttcctgcagctgtacttgc
ggagccggggccaaatggtgtgcacacgtggtggcgctctgcctcttcaggattcacaac
gcgtccgctgtttgtttgcgagcccccgtgtccgagtctctgtccaggctacagagggac
cagttgcagaagtttgcacagtatctcattagcgagcttccacaacaaattttgcccaca
gctcagcgcctattagatgagcttctttcctcacagtccacggctattaacacagtgtgt
ggagctccagaccctactgctggaccttcagcgtcagaccaaagcacgtggtacctggat
gagtccactcttagtgacaacatcaagaagaccctgcacaagttctgtggaccctcccct
gtagtctttagcgatgtgaactccatgtatctgtcgtccaccgagcctcccgctgcagca
gaatgggcctgcctgctgaggccactgaggggcagagagccagagggcatctggaacctt
ctgtctattgtgagggaaatgttcaagaggagagacagcaatgctgcaccgctgctggag
atcctgacggagcagtgcctcacctacgaacaaatcatcggttggtggtacagcgtgcgg
acgtctgcctctcacagcagcgccagtgggcatacaggtcgcagtaatggacagacggag
gtggcagctcacgcctgtgccagcatgtgcgacgaaatggtggtgctgtggaggctggct
gtgctcgaccccactatgagccctcagagacgcttggagctggcggcccagctcaagcag
tggcaccttaaagtgatcgagatcgtaaagcgtgggcagcatcgcaagtcgctggacaag
ctcttccaaggtttcaaacctgccgtcgagtcctgctacttcaactgggaagtggcgtac
cccctgcccggcattacgtactgcagcgcagaaaagaagagtgccacgttcagctggacc
cgcacggcacagctgcagaagggggccaaagcagggactagcgcagaagctttggaaccc
gggggaggcgctggacgaggtggggggtcggaaccgggagcgtccgaactgaaatcacga
agcggctctcagccagcgcagcaagaggtggccgtacgacccaaagaaaccatcgcgagc
aagagaaaaggctcaggggtcaacgcagcagggatggcggtgcgtttaggtgggggaatg
tctatatccatagacgagggtgccaagggaacgtacaaatctagcggctcctcctctact
agcggcaaacccaagctaacgcagagcagcaagggctcgtgtggaggttcgaacgccggg
ggaggaaagcatccgagcgctaaacgccgcaccagcagcgaggacagttctctggagccg
gacatggctgagctaagcctggacgatggttccagcctggcgttgggcgcggaggccagc
aacaccttcgacttcctgcctcctccgccagaaatgctgccctcgcccagctccctgctc
agagagccgcggaaatacagcggcgggaccactaaggagcgctcgttcgagagcaatcgt
ggcatccatgcggcactgccactggcagctgagccccctctttgcttccctaaagataac
ccgatacccgtgatggcagcaggagcggagaaggagatggaagtggaagctgagctagaa
gaaaacataggagatgaagatcctgtagaggacgctttgccctccatgtcggccaaggct
tctcgaggcaatagagacggagaaggaggcagcatggcggcgaatcctgggccccagatt
ccagagggagtggcagctagcgatgacccggtgggagaggacgattaccaggcgtactat
ctcagcgcggcgtccgaggagggagccgagaggggaatgccagacagcaacctcgaggaa
gagccggacatcttcgccgggatcaaacctctggagcaggaaggccagatggaggtgctg
tttgcctgtgcagaggccctgtacgctcacggctacagtaacgaagcgtgccgtctggcc
ctggagctcgccagagatctcctggccaaccctcctgacctgaaagtggagcagccacag
accaagggtaagaagagtaaagtgtcgaccagcaaacagacgcaggtggccaccaagacc
ctctcgaagacggccttcctgctcacggtgctgagcgagagacaggagttccacaacttg
gccttcagtaccggcatgttctccttggagcttcagagacctccggcttccaccaaggcc
ctggaggtgaaactggcatatcaagagtccgaagtggttgcattgctgaagaagattcct
ctgggcctggtggagatgaccgccataagggacagagcagagcagctacgtgacggaaac
ttctgtgattatcgtccggtccttcccctcatgctggccagttttatattcgatgtttta
tgcacccccgtggtttctcccacgggttctcgtccacccagtcgtaaccgtaacaatgag
atgccaggcgacgaggagctgggcttcgaggctgctgtcgctgctctaggtatgaagact
acagtcagtgaagcagagcaccctctgctgtgtgagggcaccagaagagaaaaaggagac
ctggcactggctcttatgatcacctacaaggatgaccaaagcaagctcaaaaagatttta
gacaaacttctcgatcgtgaaagtcagacccataaaccccagaccctgagttccttctac
tccagcaaaccagctacaggcagccagaagagcccgtccaagcatgcagcccatggcggt
ggggccacagggggcgtatcgaaacatgcagcgcccacggcggcagcgggctccgcttct
gtgcagggcgtggcgggggcatccgggcagcagggcgggatgacgggcaccggagttcat
ggcacagcttcgggagaggcagtcggcgagggcaaagagcaagataaaactcaaccgtcc
tcgtgtgagcagcagaatgaggtttcttcttttaagtctgagggaacggtgcccagccgg
ctggcgctcggtggtcgtggcggctatggaccgcgctgttggggatcgcctgtacggcag
aaaaagaagcacacgggcatggcgagcattgacagtagcgctccagagaccacctcggac
agctctccgacgctcagtcgacggcccctgagaggtggctgggcggcgtcttcctggggc
agggggcaagacagcgacagcatcagcagctcttcttccgactctcttggttcctcttcg
tccagtggctcacgcagagctgggggaggagccagggccaagagcacggacacgagcagg
tataaagggcgtcggcctgaatgccacgtcccacacgtgcccaatcagccatcggaggcg
gccgctcacttctacttcgaactggccaagaccgtgctggtaaaggccggaggaaacagc
tcgacctctatcttcactcagccatctgccagtgggggccaccaggggccccaccggaac
ctgcacctgtgtgccttcgagatcggcctgtatgctttgggcctgcataactttgtgtcc
cctaactggctgtccaggacgtactcctctcacgtgtcctggattacaggacaagccatg
gagatcggcagtgctgctttaaacatcctcgtggagtgttgggatggacatctcacccct
cctgaggtggcttcactggcagatcgggcgtcacgggcgcgggaccccaacatggtacgg
gctgcagcggagcttgcactgagctgcctacctcatgcccatgccctcaaccccaacgag
attcagagggcgttagtgcagtgcaaagagcaggataacatgatgctggagaaggcatgc
atggcagtagaggaggcagccaagggaggaggcgtgtatcccgaggttctgttcgaggtg
gcccatcagtggtactggctgtacgagcagacgataggcggggtctccaccggacagagg
gaagggccgaccaggtgtggggcgaacggcggagcaggtcgccggcctccggagatgaac
tgtggcatcatggacagctccggggccatagactcggccggcgtagcggcgctcacggcg
tccgtcagcgcgaccgccgtggtgcccgtcatatcggtgggctccaccctctaccagtca
catacgatcccgggcacggccatagcgcacacacagggcctgcacccctacaccaccatc
caggctcatctgcccacggtctgcacccagcagtacctggggcatcagcttcagcacatc
ccccggcctgctgtcttccccatagcagggactgcgtatccgcaaggaatgcacccagct
tttatcggggcacagtacccgttctctgtagccaccggccctcatccccccatggcagcg
acggctgtcaccttccctggagttcccgtaccggccatgactcagatcgccgttcacccc
taccacacggccgaggcggcgttacccctcagcactactgtggcagtggccggaattcat
tcaggctccaccatccaggctattcagagtgcgtctcttcccggcctctcgtctcagccg
ccttcgttggtcagcgtgtcgttcccggtggaggacgagcagcacagtcaccctgttagc
cagcagggcctgcactacctgcactcagcctacagagttggtatgctggccctggagatg
ctgggcagaagggctcacaatgaccatccaaacaacttctcccgcaaccccccgtacacg
gaggacgtgaaatggctgctcagccttgctgcacgactcggtgtgaactacgtgtatcag
ttctgcgtgggtgctgcgaaaggtgtgttgagtccattcgtcctgcaggagatcatcatg
gaagctctgcagagactaaaccccgcccacatccacgctcacctccgcacccccgccttc
catcagctcgtgcagcgctgccaacaggcttacctacagtacatcaactaccggctgatc
cacctgacgccggcggactacgacgacttcgttaacatcatccgaagcgcacgcggggcg
ttctgtctcacccccgtgggcatgatgcagttcaacgacgtcctacagaccctaaagaga
gggaagcagaccaaggagctgtggcagcggatctcgctggagatggcgacgttttcgccc
tga
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