Trichomycterus rosablanca: 134314843
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Entry
134314843 CDS
T09921
Symbol
valopa
Name
(RefSeq) vertebrate ancient long opsin a
KO
K04256
c-opsin
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trn01009
]
134314843 (valopa)
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
trn04030
]
134314843 (valopa)
Protein phosphatases and associated proteins [BR:
trn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134314843 (valopa)
G protein-coupled receptors [BR:
trn04030
]
Rhodopsin family
Vision
Opsin
134314843 (valopa)
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GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srw
7TM_GPCR_Srsx
7TM_GPCR_Srv
7tm_4
Motif
Other DBs
NCBI-GeneID:
134314843
NCBI-ProteinID:
XP_062851691
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Position
5:complement(8663856..8681369)
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AA seq
385 aa
AA seq
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MDSFGMAVNGVSYTEVAVVLAPDDPFKGPSKSIAPWSFKLLAAWMSVVTVLSLSENFLVM
LVTHKFKQLRQPMNYLIVNLSLADFLMSLIGGTISVVTNYYGYFFLGSWACVLEGFAVTF
FGIVALWSLAVLAFERFFVICRPLGNVRLQGKHAALGLLFVWTFSFIWTIPPVLGWSSYT
VSKIGTTCEPNWYSGDPFDHTFIITFFVTCFILPLGVIIVCYSKLLRKLRKVSNTHGRLG
NARKPERQVSRMVVVMIVAFMVAWTPYAMFSIIVTAYPTIYFDPLLAAVPAFFAKTAAVY
NPVIYVFMNQQFRKCLLQLLSCNNTLEANQTTDRADMTGESNRGEMSTITARIPTGTASP
KLDSQHSNSSFTDPLPIPENKVCPI
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atggactcatttgggatggcagtgaacggtgtcagttacacagaagtagctgtggtactg
gcaccagatgatccctttaaaggaccgtccaaatccatcgcgccctggagcttcaaactg
ttggcagcctggatgtccgtagtgaccgtactgtccctgtccgaaaactttctggtgatg
ctggtcactcacaagtttaaacagctcagacagccgatgaattatctcattgtgaattta
tcactggcagattttctcatgtcactgatcggagggacgataagtgtggtgacaaattat
tacggctacttcttcctaggcagttgggcgtgtgtgctggagggatttgcggtcactttt
ttcggtatagtggcattgtggtccctggcagtcctcgcatttgagcggttctttgtcatc
tgccggcctctgggaaacgttcgtttacagggcaaacacgcagcgctgggcttgctattt
gtctggactttctcttttatttggaccattccacctgtactgggctggagcagctacact
gtcagcaagattggcaccacatgtgaacccaactggtactctggagacccatttgaccac
acatttatcatcacattttttgtcacctgtttcatcttgcctctgggcgtcatcattgtg
tgctacagcaagctgctgcggaagctgagaaaggtgtctaacactcatggcaggttggga
aatgcccgtaaacctgagcggcaggtgtctcgtatggtagtggtaatgattgtggccttt
atggtggcctggacaccatatgcaatgttctccatcatcgttactgcctaccccaccatc
tattttgaccccctgctggctgctgttcctgcattctttgcgaaaactgctgcagtctac
aatccagtcatatatgtttttatgaaccagcagttccggaagtgtctgcttcaactgctg
agttgcaacaatacactggaggcaaaccaaaccacagatcgagcagacatgaccggggag
agcaacagaggcgagatgtcaaccatcactgcccgaatcccaactggtactgcttcaccc
aaactggacagtcaacacagcaactcgagctttactgacccgctgccgattccagaaaac
aaagtgtgtcccatctaa
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