Trichomycterus rosablanca: 134314863
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Entry
134314863 CDS
T09921
Symbol
cfap43
Name
(RefSeq) cilia- and flagella-associated protein 43
KO
K24223
cilia- and flagella-associated protein 43
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
trn03037
]
134314863 (cfap43)
Cilium and associated proteins [BR:
trn03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
134314863 (cfap43)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40
Beta-prop_EML
CFAP43_N
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
134314863
NCBI-ProteinID:
XP_062851720
LinkDB
All DBs
Position
5:10176217..10199892
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AA seq
1666 aa
AA seq
DB search
MDVLDSLEVKWVQGFTSSSVEFVDKKTACYTCGNYIIFLNVETKMRDVLQGPGRGIGVFT
ANGHSKTLAFSDQKLSPSIFVYSYPELTLRSELKGTAKLAYTSLALSNAGPYLACCSSLP
DYTITVWNWETGAAVCSHPLAEDDIITLAFSSTNWQQICAINAKSLTVWNIERSNDFHLM
KPSVIDLPVSDGSILEREVIPSHVTNGKLTYYGPQMPTSAIAGLVDDRADNFLPQKSVKP
RLRPCAICWSVSSDLYIGSREGFLLSVNPETMLVTVLYNPQNKDSLSDDKEHLAMREGSF
QSLALHNNGVFATGTDGVLRHLQIKGNQVEVVETLALEKPVSTLCCSPDRETLLLFSTSG
SIYKYKPGLTDKVVKIMDMLCGDFVTAAPLHTDNNLCVSIRESGELQIWSLDEGLCVASI
TLKTKVSSMVCCPIAQYVAVGTVTGHVLFVDLSRVEQPRLVHKVHLYHVPVDHLAFDQGG
NFLITGASEYQIFVLHARPSKAFEVIGYTEVLGTTVSLSTQFEKEKEQIKVLVLCNTEKD
HGKEGKLKKENLLVLLSLSVHQILGTRDFVDHRGCLHKYIVQTCVYKLPHVLSSCVLGTK
NIFGYCHERKVLQRFQLPETVDKSHSIEEAVLLSLDKEVEGHSLGPASVLLSLNQSWLAS
VGRDGLLRIRNISTMERCVQMQCHSCWLGGVRSVSFTPDSQTLITTGLQDGSLVCSRLRL
KTGGHDIVNTATESSLSLVASLEAITSYENSVLSNMTDWKPQAKSPVESALSHKEEISEI
NNMPDKDKSDTSLLPATQCCSTWLDHKLEEVLKQESQQFAETRKSIKESLKQLTDTIQTM
MQENENLPEIEKLEQQEFNLDTEEQQRLQAEGQQEITRVRNEIEMENLAKCYLRDILRKE
CWDSMKVKEKAIKAFHSDYEVHNYPMKERTAEELDELHRVETNRKIELANSSLQKGILEN
RSKAPLEREREEDEEGHEAESVSLSGSLSAQTGGSNLYLYSQFNLHAREQKINQIILLQD
VIYKVKTAFNSGFETVYKQKEQEISRVRDKNKRITEILTELEMQEKLWEPSLTDSERPER
ALTVMDLEITAQKYLTPEQRHIEEEQRNTEEQKRLAAKGDNIRERALDDMMNGVLVVKKE
DILRMEVPLPEFMIKPELQWTDEERRSYQEYEKKAKELSEEKDKYIKTLEAEMKKLYTSI
KDATQTFDETLNKLFERKVKTEMVIYQEELKITNLAYSLIIEEDIVNREKELNYRLEKAR
TRKNKAGDAVKKHKDDVEAFREMYDNTVAEDKLLDKGFRKDFFDVSGHIVDQLYKLYKRR
PRVQRIRTQTDYISPSTEPVLGRAAAEGLSQMMKAMEELDAPENMPEGVDQDVWDRFCLA
RRIKVESEQQVKIKALTLAEMQAFLQKRMDENENAQMEMKHLMDELNGLREEKTRFCLDT
MVQILIKQGQVEVETEDLITDYSESLLVHRSVVEDLNNTIRTLGEQKIAIMEECKDFRKG
IIQQEWGHKRMSMQIKDLHSKARDIQMLHVSQELQEYLSETDHDNRMSRKVSSLEKTLSL
QEQTHEKHIENYKKLIKQLNRQAELKRDKTAALDLQLTSMQVAVAERKNIYEATAMEEDQ
EHDVREHYQEILERKKLMDLAKAQTRELVTLTAELDRMRKKTFPAL
NT seq
5001 nt
NT seq
+upstream
nt +downstream
nt
atggatgttttggatagtttggaagtaaagtgggtgcaaggcttcacaagcagcagtgtg
gagtttgtggataagaaaacagcctgctacacctgtggaaattacatcatttttcttaat
gtggaaacgaaaatgagagatgtgcttcagggtcctggtcgtggaattggggtcttcaca
gccaacgggcacagcaaaactcttgccttttctgatcagaaactttccccctctatattt
gtgtacagctaccctgaacttaccctgagatctgagctcaaaggtacagctaaactggca
tacacatccctggcactgagcaatgctggcccttatttagcttgttgctcctctttacct
gattacaccatcacagtatggaactgggaaactggggcagcagtttgcagccatcctctt
gctgaagatgatattataaccctggctttcagttcaacaaattggcagcaaatctgtgcc
ataaatgcaaaatcactcacagtttggaatattgaaagaagcaatgatttccatctgatg
aaacccagtgtaattgatctccctgttagtgatggctctattttggagcgtgaggtcatc
ccttctcacgtaaccaatgggaagctaacgtactatggccctcagatgcccacttcagct
attgcagggctggttgatgacagagcagataactttctgcctcagaagagtgtgaagcca
cgactgcgcccatgtgccatctgctggtcagtttcatctgacctgtatataggaagcagg
gaaggatttttactgtcagtaaaccctgaaacaatgcttgtcacagttctgtacaatcct
cagaataaagactctctctctgatgacaaagagcacctggcgatgagggagggcagcttt
cagagcttggcactgcacaataatggagtgtttgctacaggaaccgatggtgttttacga
cacctacaaattaaaggaaaccaagttgaagtggttgagactttggctttagagaaacca
gtttctacattgtgctgttcacctgacagagaaaccctgctgctgttctctaccagtgga
agcatatacaaatataaaccagggctcacagataaggttgttaaaatcatggacatgctg
tgtggagactttgtcactgctgctccactacacacagacaacaacctctgtgtgtcaatc
agagagtctggagagctgcagatatggtctctggatgagggattgtgtgttgcatcaatc
actttaaagacaaaagtgagcagcatggtgtgttgccctattgctcaatacgtagctgtg
ggtacagtcacgggtcatgttctgtttgtggatctgagcagggtggagcaacctcgactg
gttcacaaagtccatctgtaccatgtacctgttgatcatttagcttttgatcaagggggc
aattttttgatcacaggagcatccgagtatcagatatttgttttgcatgcaagaccttcc
aaagcatttgaggttattggttacacagaggtattgggcaccactgtgagtctgtccact
cagtttgagaaagagaaggagcagataaaggttctagtgctctgtaatactgagaaggat
catgggaaagagggaaaactcaaaaaagaaaatctgcttgtgctgctctcactgtctgta
catcagatcttaggtactagagattttgttgaccatcgtggctgtctacacaaatatatc
gttcaaacctgcgtttataagctgccacatgtactttcttcatgtgttctgggaaccaaa
aatatatttggttattgtcacgagaggaaagttctgcagagatttcaacttccagagact
gtggataaatcacacagcatagaggaagcagttctactgagtctagacaaagaggtagag
ggtcattctcttggtcctgcatcagtgcttctctcactcaatcagtcctggctggcttct
gtaggcagagacgggctacttcgtatacgtaatatttccacaatggagagatgtgtgcaa
atgcagtgccactcttgctggttgggaggagttcgctctgtgtcttttactcctgacagt
cagacactcatcaccacaggcctgcaagatggctctttggtctgtagtagactcaggtta
aaaacaggtggacatgacatagtgaacacagctactgagagtagcctgtctttggtggcc
tcccttgaggccataacatcttatgagaattcagtcctcagtaacatgactgactggaaa
ccacaagcaaagtcaccagtggaatcggcactgtcacacaaagaagagatcagtgaaata
aataacatgcctgacaaggataagagcgacaccagcctgcttcctgcaactcaatgctgt
tccacatggctggatcataagctagaggaagtactcaaacaggagagccagcagtttgca
gagacccggaagagcattaaggagagcctgaaacaactgactgacacaattcagactatg
atgcaggagaatgagaacctgccagagatcgagaagctggagcagcaggagtttaatctg
gacacagaggagcagcagagactacaagctgaggggcagcaggagatcacaagggtgcga
aatgagattgagatggagaatctggccaaatgctatctgcgggacattcttaggaaagag
tgttgggattccatgaaagtcaaagaaaaagccatcaaggcctttcactcagattatgaa
gtgcataactaccctatgaaggaacgcactgcagaggaactagatgagcttcacagggtg
gagaccaatcgaaagattgaactggccaactctagtctccagaaaggcattttggagaat
agaagcaaagcaccattagagagggagagagaggaggatgaggagggacatgaggcagaa
agcgtatccttatcaggaagtctgagtgctcaaactggaggttccaacttgtacttatac
agccagttcaacctgcatgcgagagagcagaagattaaccaaatcatcctgctacaggat
gttatctacaaagtaaaaacagctttcaactccgggtttgagactgtgtacaagcagaag
gaacaagagatcagccgtgtgagggacaagaacaagcgcatcacagagattttaacagag
ctggagatgcaagagaaactgtgggagcccagtttaacagacagtgagagaccagaacga
gcccttaccgttatggatttagagatcactgcacagaaatacttgacacctgagcaaaga
catatagaggaagagcagagaaacacagaggagcagaagcgtcttgcagccaagggtgac
aatatcagagagagagctctggatgatatgatgaatggagtacttgtggtcaaaaaagag
gacatcctaagaatggaagtgccattgcctgaatttatgatcaagcctgagctgcagtgg
actgacgaggagagaagaagctaccaagagtatgagaaaaaagcaaaggagctcagtgaa
gaaaaagataaatatataaagacgctggaagcagagatgaaaaaactttatacatctatt
aaagatgccacccagacctttgatgaaacacttaataaactgtttgaacgaaaggtgaaa
acagagatggttatataccaggaagagttaaagattacaaatcttgcttattccttaata
attgaggaggacattgtaaacagagaaaaagaactcaactacagactggagaaggcaaga
acccggaagaataaagctggtgatgctgtgaaaaaacacaaagatgatgttgaggcattt
cgagaaatgtatgataacacagtagctgaggataaacttttagacaaaggatttcgcaaa
gatttctttgatgtttctgggcatattgttgaccaactgtacaagctttacaagcgtaga
cccagggtgcaaagaataaggacccagacagattacataagtccatctactgagcctgtg
ttgggacgagcagcagcagaaggactctcacagatgatgaaggccatggaggagttagat
gctccagagaacatgccagagggtgtggaccaagacgtctgggatcgattctgcctggcc
agaagaattaaagtggaaagtgagcagcaggtaaaaataaaggcactgactttagcagag
atgcaagcttttctgcagaagagaatggatgagaatgagaatgcacaaatggaaatgaaa
catctcatggatgaacttaacggcctgcgagaagagaagacaagattctgtttggacact
atggtgcaaattctgataaagcaggggcaggttgaggtggaaactgaagacttaatcaca
gactactcagagtcactgttggtccaccgcagtgttgtagaagaccttaacaacactatc
aggactttaggagaacagaagattgccattatggaggagtgcaaagacttccgtaaagga
attatacagcaggaatgggggcataaaagaatgagtatgcagattaaggatctccacagc
aaagccagagatatacagatgctgcatgtatctcaggaacttcaagagtacctgagtgag
acagaccatgacaacaggatgtcgaggaaggtatcctctctagagaaaacattatcttta
caggagcagactcatgagaaacatatagaaaactataaaaaacttataaagcagctaaat
agacaggctgaactgaagagagacaaaactgcagctctagacctgcagctgaccagcatg
caagtggctgttgcagaaagaaaaaacatctatgaggccacagcaatggaggaggatcaa
gagcatgatgttagagaacactaccaagaaatcctagagagaaagaagctcatggatttg
gcaaaagctcaaactagggagctagtcacactgaccgctgagttggaccgtatgcggaag
aagacattccctgctctttga
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