Trichomycterus rosablanca: 134314866
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Entry
134314866 CDS
T09921
Symbol
dcaf5
Name
(RefSeq) DDB1- and CUL4-associated factor 5
KO
K11800
DDB1- and CUL4-associated factor 5
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134314866 (dcaf5)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
134314866 (dcaf5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
WDR55
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR3_2nd
WD40_Gbeta
Beta-prop_EML
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR41
Beta-prop_SPT8
DRAT
Motif
Other DBs
NCBI-GeneID:
134314866
NCBI-ProteinID:
XP_062851725
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All DBs
Position
5:complement(10362937..10369193)
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AA seq
772 aa
AA seq
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MRGTGSGGCGMRCSMGFLSRRELFGSPLLTQDFQRRRLGGCSSLFRSDLLAHYGCVNAIE
FSNNGGQWLVSGGDDRRVLLWHMEKAIQTRTKPVKLKGEHLSNIFCLAFDSTNTRVFSGG
NDEQVILHDVERGDTLNVFLHDDAVYGLSVSPVNDNVFASSSDDGRVLIWDTREPPHGEP
FCLANYPSAFHSVMFNPVEPRLLATANSKEGVGLWDIRKPGSSLLRYGGSLSLQSAMSVR
FNSAGTQLLALRRRLPPVLYELHSRLPSFQFDNQGYFNSCTMKSCCFAGDQDQYILSGSD
DFNLYMWKIPKDPEAGGRVVNGAFMVLKGHRSIVNQVRFNPYTYMICSSGVEKVIKVWSP
YQQTDCEGDLEGRVEDKSRSLYTHEEYISLVLNSGSGLSHDYVSQSEQEDPRMMAFFDSL
VRREIEGWSSDSDSDLSEGAIMQLHVRGRSHIRSSNHAASADPPPPTDATNAHHSDSDHS
SLSSSSSSVLSGPASDNERVEPEEIGSQRMRRARSRRAFLFDIANEDSDSSGLWVDPLVR
PRSPSPRENSSLSQTSSPSSSPSSSSSSSSNSDEDEAELQRSNVRQRNAARKRSNIHWPH
KDSSHSLESATDYSRYPKISVNESSSASSSGEESQPIKTSSKNKRRGLASSPAPGPSSAA
HGNKLKVRSHFTSLGHNPEVMERAVSRMGLRVDSGAELEAGKSSDDEAGVNGNTSAHNEN
CVVSTILETSQEAGPDSDSAESRTQQTFVSVKRTRLGSDEEEEPPSEKKLKT
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagggggaccggttcggggggctgtgggatgcggtgctcgatgggctttctgtcccgc
agagagctgttcggatccccgctgctcactcaggacttccagcgcaggagactggggggc
tgcagcagcctcttccgctccgacctgcttgcacactacggctgtgttaatgccatcgag
ttctccaacaacggggggcagtggctcgtctcaggtggagatgatcgacgtgtgctgctg
tggcacatggagaaagccatccagacccgcaccaaacctgtcaaactgaagggagaacat
ctgtccaacatcttctgtctggccttcgacagcactaacacccgtgtcttctctggaggg
aatgatgagcaggtaatcctacatgatgttgagcgtggtgacaccctgaacgtgtttctc
catgatgatgctgtgtatggtctctctgtcagtcctgttaacgataacgtgtttgccagc
tcatcagatgatggccgggttctcatctgggacacacgagagcccccacacggagaacca
ttctgcctggcaaattacccatctgcattccacagtgtgatgtttaacccggtggaaccg
cggttacttgccactgccaactctaaagagggcgtgggcttgtgggacatccgtaaacca
ggcagttctctcttgcggtatggaggttctctgtctctgcagagtgctatgagtgtacgc
tttaacagtgctggtactcagttgttggcgctgcggcggcgtttaccccccgtcctgtac
gagctgcactcccggctgcccagcttccaattcgataatcagggctacttcaactcctgc
accatgaagagctgctgctttgctggagaccaggaccagtacattctgtcaggttctgat
gatttcaatctgtacatgtggaaaatcccaaaagacccagaagcagggggtcgggtggtg
aatggagcattcatggtgctgaagggccaccgttccattgttaatcaggtccgatttaac
ccgtacacctatatgatctgctcctccggcgtcgagaaagtcattaaggtgtggagtccg
tatcagcagacggactgtgagggggatttggagggcagggtggaagataagtcacgctcg
ctctacacccacgaggagtacattagcctggtgctaaacagtggcagtggcctgtcacat
gactatgtcagccaatcagagcaggaggatccacgcatgatggccttctttgattcgcta
gtacggcgagagattgagggctggagctccgactcggattctgacctgagcgagggtgca
attatgcagctgcatgttagggggcgcagccatatccgctcctccaatcacgctgcctcg
gcagatccaccgccacctactgacgccacgaatgctcaccatagtgactcagaccactcg
tctttatcttcttcatcctcatctgtattatcaggccctgcatctgataatgagagggtg
gagcctgaggagattgggtcacagcgtatgaggagggcgaggtcaagacgagcgtttttg
tttgacattgcgaacgaggactctgattccagtgggctctgggtggacccgttggttcgc
ccacgctctccaagcccacgtgaaaactccagtctgagtcaaacctccagccccagctcc
tcgcccagctcctcgtctagttcctcctccaatagcgatgaagacgaggcggagcttcag
agaagcaatgtacggcagcgtaatgcggccagaaaaagaagcaacatccactggccacac
aaagactcttctcactcgcttgaaagtgccacagattacagccgttatccaaaaatttca
gttaatgaatcatcgtctgcttcttcctctggagaagaaagccagccaatcaagaccagc
agtaaaaataagaggcgtggccttgcatctagccccgcccctggtccttcgtcagctgcg
catggtaacaagctaaaggtcagaagtcacttcacttctttaggtcataacccagaagtc
atggagagggcggtgtcgagaatgggtctcagggtggattcaggggcagagcttgaggct
ggaaagagcagcgatgatgaagcgggtgttaacggaaacacaagtgctcacaatgagaac
tgcgtagtctcaactattctggaaacatcacaagaggcggggccggactctgactcagca
gaatcaaggacccagcaaacctttgttagtgtgaaacggacacgattgggctctgacgag
gaggaggagcctccatcagaaaaaaagctgaaaacgtga
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