Trichomycterus rosablanca: 134314869
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Entry
134314869 CDS
T09921
Symbol
srsf5a
Name
(RefSeq) serine and arginine rich splicing factor 5a
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
trn
Trichomycterus rosablanca
Pathway
trn03040
Spliceosome
trn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134314869 (srsf5a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134314869 (srsf5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134314869 (srsf5a)
Spliceosome [BR:
trn03041
]
Common components
Common spliceosomal components
SR proteins
134314869 (srsf5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
RRM_occluded
DbpA
Nup35_RRM_2
CDC45
Motif
Other DBs
NCBI-GeneID:
134314869
NCBI-ProteinID:
XP_062851728
LinkDB
All DBs
Position
5:complement(10394002..10399329)
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AA seq
293 aa
AA seq
DB search
MSRVFIGRLSPHARERDVEKFFKGYGRIRDINLKNGFGFVEFDDHRDADDAVYELNGKEL
CNERVTIEHARSRRGRGGGGGGGGGAGGGGGGGGRFSPRFTGYRQSRSTTSRYGPPVRTE
HRIVVQNLSSRISWQDLKDLMRKAGDVTFVDAHRSNKNEGVVEFASHSDMKNALEKLDGT
ELNGRKIKLYEDRKRSHSRSRSRSSSRSRSRSRSKSASRSRSREDKRGEDKRESKREKRS
HSRSRSVSRTPEKKQATKSESRSRSRSPTPRKQSRSRSRSRSRSRSQSAESQH
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgagtgtttattggtcgtctgagcccccacgcccgtgagagagatgtggagaag
ttctttaaaggttatgggcgcatccgtgatattaatctgaagaatggatttggatttgtg
gagtttgatgaccatagagatgcagatgatgcggtttatgagttgaatggaaaggagctt
tgcaatgagagggtgactattgagcatgctcgttctcgacgtggcagaggaggaggagga
ggaggtggtggtggtgctggtggaggaggtggtggtggtggacgtttctctccacgtttc
acaggctatcggcaatcacgcagcacaacatccaggtatggacctcctgtgcgcacagag
catagaattgtggtgcagaatctgtcatcccgtatcagctggcaggacctgaaagacttg
atgaggaaagcaggagatgtaacgtttgtggatgcccacagatccaacaaaaacgaaggt
gtggtggaatttgcctcacacagcgatatgaagaacgccctcgaaaaattggacggtact
gagctgaacggccgcaaaatcaaactgtacgaggatcgtaagagaagccacagcaggagt
cgctcccgcagctcctcacgctcccgctctcgctcccgttccaagtcggccagcagaagc
cgcagccgcgaggacaaacgcggggaagacaagcgggagagcaaacgggagaagcgatcc
cacagccgctcgcgctcggtcagtcgcacacccgaaaagaagcaggccaccaagtccgag
tctcgctctcgctctagatctcctactccgaggaagcagtctcgctcacgctctcggtcc
cggtcccggtctcggtcacagtccgccgagagtcagcactga
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