Trichomycterus rosablanca: 134314891
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Entry
134314891 CDS
T09921
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
trn
Trichomycterus rosablanca
Pathway
trn04137
Mitophagy - animal
trn04140
Autophagy - animal
trn04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
134314891 (hif1aa)
04137 Mitophagy - animal
134314891 (hif1aa)
04148 Efferocytosis
134314891 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134314891 (hif1aa)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
134314891 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
PAS
PAS_9
HIF-1
PAS_4
Motif
Other DBs
NCBI-GeneID:
134314891
NCBI-ProteinID:
XP_062851765
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All DBs
Position
5:10935857..10956997
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AA seq
652 aa
AA seq
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MTSGATADKKRQSSERRKARCRDAARCRRVKETEVFTELANQLPLHHSIISGLDKASVIR
LTLSYLHLRSALNTVKMDELELDTQWTSSFLKALDGFLMILSKDGDVVYVSENVSRCLGI
PQLDLSGQSVFDFSHPCDHEEIREMLVHNRTGSCKKMRDEQSCLFRMKCTLTNRGRTINI
RSATWKVLRCSGHIRVECTQKSDCEEKSEPVSYLVLICEPIPHPADIEVLLDSRTFLSKH
TLDMRFIYCDDRITELLGYDPEDLLHHSVYEFYHALDSDSLTKTHHNLMVKGQACTGQYR
MLVKSGGFVWVETQATVIYNNKNSQPQCVICLNYVLSGVEEPGLVLSLHQSAIKEETEDK
CERQSEREKQDVVDQEKKGDEEKPETSDEEMEIQTDIAVTLDFSHSETEVTLMKDEPLYN
DVMLPSILSPLSPVSEAPCESINTTPSQLENFSFPPSPATNSSSCCSSQEGEDLALEMLA
PYISMDDDYQLQMRTTVKAKGLSLALGDPPLNSNQENTSTTNMNAKSSNTEQRAHQLGVC
HSPTTLPSLKRKLETIYPSQPAGLVVTESPQIKKTKFIVSEALPTVSLPETLTILLLPPE
VLNQLMTGSLLSGAILNPLPNLSGFNYDATPPVALQHSLQGEELQPKLDQVI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgacttctggagcaacagctgataagaaaagacagagttctgaacggaggaaggcaagg
tgtcgtgatgcagcacgctgtagaagggtaaaggagacagaggtgtttactgagctggcc
aatcagcttcctctccatcacagcatcatctcaggactggataaagcttcggtcattcgc
cttacattgagctaccttcatctacgttctgccctcaacacagtgaagatggatgagctg
gagttggacacgcagtggacttcctcctttctgaaggctctcgatggcttcctcatgatc
ctctctaaggatggagatgttgtctatgtgtccgaaaatgtcagcaggtgcctggggatc
cctcagcttgatctgtcaggacaaagtgtgtttgatttctcacatccatgtgaccatgaa
gagatcagagagatgctggtgcacaacagaacaggttcctgtaagaaaatgagggatgaa
cagagttgcttgttcaggatgaagtgcactctgaccaatagggggcgcaccatcaacatc
agatctgctacatggaaggtgctgcgttgttctggacacattcgtgtggagtgcactcag
aagagtgattgcgaggaaaaaagtgaacctgtctcctacctggtgctgatctgtgagccg
atccctcatcctgctgatattgaggttcttctggactccagaacatttctgagcaaacac
acactcgacatgcggttcatctattgcgatgacaggatcacagagttgttggggtatgac
cctgaagatctgctccaccattctgtatatgaattttaccatgctttggactcagacagt
ctcaccaaaacacaccacaacttgatggtgaaaggccaggcatgtaccggtcagtaccgt
atgttggtgaagagtggaggttttgtgtgggtggagacccaggccaccgttatttacaac
aacaaaaactctcagccacagtgtgtcatctgtctaaactacgtcctcagtggtgttgaa
gagcctggactcgttctctctcttcatcagtctgcaataaaggaggagactgaggacaag
tgtgagagacagagtgaaagagaaaagcaggatgtggtagatcaggagaaaaagggagat
gaggagaaaccagagacgagtgatgaagaaatggagatacagacggacattgctgttaca
ctagacttcagtcacagtgaaacagaagtgacactgatgaaggacgagcctctctacaat
gatgtcatgttgcccagcattctgtcaccactgtcacctgtcagtgaagccccatgtgaa
agcataaacactactccgtcacagctagagaacttttcctttcctccatcccctgcaaca
aattcttccagttgctgttccagtcaggaaggagaggatttggctttggagatgttggct
ccctatatctccatggatgacgattatcagcttcagatgcgcacaacagtgaaagccaag
ggtttaagtttggctctaggagatccaccacttaactcgaaccaggaaaacaccagcacc
acaaacatgaatgcaaagtccagcaatacagaacaaagagctcatcagctgggcgtatgt
cactcccctaccacactgccaagcctaaagaggaaattagaaacaatttacccatctcag
cctgcagggctggttgttactgagtcacctcagatcaagaagacaaagttcatagtttca
gaggctcttccaacagtttccctgcctgagacactgactatactactgctgccacctgag
gtcttaaaccagttaatgactgggtctttgcttagtggagccattttgaacccactgcca
aaccttagtggtttcaactatgatgctactccacctgtagctttgcagcacagtttacag
ggggaggaacttcagcctaaactggaccaggtcatttag
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