Trichomycterus rosablanca: 134314954
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Entry
134314954 CDS
T09921
Symbol
capn2a
Name
(RefSeq) calpain 2, (m/II) large subunit a
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04141
Protein processing in endoplasmic reticulum
trn04210
Apoptosis
trn04217
Necroptosis
trn04218
Cellular senescence
trn04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
134314954 (capn2a)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
134314954 (capn2a)
04217 Necroptosis
134314954 (capn2a)
04218 Cellular senescence
134314954 (capn2a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
134314954 (capn2a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
trn01002
]
134314954 (capn2a)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
134314954 (capn2a)
Peptidases and inhibitors [BR:
trn01002
]
Cysteine peptidases
Family C2: calpain family
134314954 (capn2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
134314954
NCBI-ProteinID:
XP_062851860
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All DBs
Position
5:19507828..19531442
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AA seq
698 aa
AA seq
DB search
MAGVASTLAKKRALAAGFGTNANAVKYLNQNFHSLRTECLNRRELFCDPTFPAGPECLGF
NELGPRSYKTRGVQWKRPGEFTSRPEFIIGGARRTDICQGSLGDCWLLAAIASLTLNEDV
LSRVVPSDQGFGDNYAGIFHFQFWQFGEWVDVVIDDRLPTKDGELLFVHSATGSEFWSAL
LEKAYAKINGCYEALSGGSTTEGFEDFTGGIAEMYELKSAPATMFHIIKKALESGALLGC
SIDITSAADSEAVTHQKLVKGHAYSVTGASEVNYRGRKEKLIRVRNPWGQVEWTGAWSDN
SSEWNNVNASERENVKAEDGEFWMSFPDFKRHYSCLEICTLTPDTITSDQVKHWSVCKFD
GSWRRGSTAGGCRNNPYTFWMNPQFKIRLEEEDDDPDDNDVGCSVVIGLIQKNRRKLRKA
GEDMHTIGYAIYEVPSQFHGQKEVHLSKEYFLTHAQKARSETFINLREVSTRFKLPPGEY
LIVPSTFEPHKNGDFCVRVFSEKQSEMQICDDPVEADIEDDTVSEDEVDAGFRGLFTKLA
GEDMEISACELKTILNKIVAKRTDIKTDGFSLETCKTMVNLMDDSGNGKLGLSEFATLWK
KIQKYLAIYKKNDMDESGCMSTPEMRMALKEAGFSLDNSLHQLLAARYGDMDMVIDFDSF
VACLMRLEMMFKIFKRIDAHKSGFIELDLLRWLSFAMI
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atggccggagtagcgtccacgttggctaaaaagagggcactggctgcgggtttcgggact
aacgctaacgctgtaaaatatctcaatcagaactttcactctttgagaactgagtgtctg
aaccgcagagagcttttctgcgaccccacgttccccgcaggtcctgagtgtctgggattt
aacgagctcggtccacgctcatataaaacaagaggcgttcagtggaaaagacctggggag
tttacttccaggccagaattcattattggaggagcaagaagaactgatatttgtcaagga
agcttaggtgattgctggctcctagcagctattgcatccctcactctcaatgaagatgta
ttgtctcgagtggtaccatcagatcaaggctttggggataactatgctggtatttttcac
tttcagttttggcagtttggagagtgggtagatgtagtcattgatgaccgactgcccacc
aaagatggagagctgctatttgttcattcagccacaggttctgagttctggagcgccctg
ctggagaaagcctatgctaaaataaatggatgttatgaggctctctctggaggctctacc
actgaagggtttgaggacttcacaggaggcatagcggagatgtatgagctgaaatctgct
ccagccactatgtttcacatcatcaagaaggctctggagtctggagctctgttggggtgt
tctatagacatcacaagtgcagcagactccgaagccgtcactcaccaaaagcttgtgaag
gggcatgcttattccgtgactggggcctctgaggtgaactaccgtggtcgtaaggagaag
ctaatcagagtgcggaacccctggggtcaggtggagtggactggagcctggagtgacaac
tcctctgagtggaacaatgtgaatgcttctgaacgtgaaaatgtaaaagctgaggatgga
gaattctggatgtcattcccagactttaagagacattattcctgcctggaaatttgcact
ttgactccagacactattacgtctgaccaggtaaaacactggagtgtgtgcaaatttgat
ggcagctggagaaggggctcgacagctggtggttgcagaaataatccatatacattctgg
atgaatccacagtttaagatcaggttagaggaagaggacgatgatcctgatgataatgat
gttggctgtagtgtagtaattggcctcatccagaagaaccggcgcaagctgaggaaagct
ggagaggacatgcacaccattggttacgccatctatgaagtcccatctcagtttcatggg
caaaaggaagtgcaccttagtaaggagtattttctgacacatgctcagaaagctcgctct
gagacctttatcaatctgcgagaggtcagcactcgctttaaattgcctcctggagagtac
ctcattgttccttctacctttgaaccacacaagaatggggacttctgtgttcgggtgttc
tcagagaaacagtctgaaatgcaaatttgtgacgaccctgttgaggctgacatagaggat
gacactgtgtcagaggatgaagttgatgccggatttagggggctgtttaccaaactggca
ggagaggacatggagatttcagcatgtgaactcaaaaccattctcaacaaaatagttgca
aaaaggacagatattaaaacagatggcttcagtttggaaacgtgcaaaaccatggtgaac
ctaatggatgacagtggtaatggcaagcttgggttgagtgaatttgccaccttgtggaag
aagattcaaaaatacttggcaatctacaagaaaaatgatatggatgaatctggctgtatg
agtacaccagagatgcgaatggctttaaaagaagcaggctttagtctggacaacagtctc
catcaacttctggctgctcgatacggagacatggacatggtgatcgactttgacagcttt
gtagcttgcttgatgcgcttggagatgatgttcaaaatattcaagagaattgatgctcat
aaaagtggattcattgagttggaccttctacggtggctgtcatttgctatgatctag
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