Trichomycterus rosablanca: 134315073
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Entry
134315073 CDS
T09921
Symbol
dctn1b
Name
(RefSeq) dynactin subunit 1 isoform X1
KO
K04648
dynactin 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04814
Motor proteins
trn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
134315073 (dctn1b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134315073 (dctn1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134315073 (dctn1b)
03036 Chromosome and associated proteins [BR:
trn03036
]
134315073 (dctn1b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
trn04812
]
134315073 (dctn1b)
Membrane trafficking [BR:
trn04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
134315073 (dctn1b)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Dynactin complex
134315073 (dctn1b)
Cytoskeleton proteins [BR:
trn04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dynactins
134315073 (dctn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynactin
CAP_GLY
DUF4407
Lipase_GDSL_2
DUF7259
Motif
Other DBs
NCBI-GeneID:
134315073
NCBI-ProteinID:
XP_062852077
LinkDB
All DBs
Position
5:complement(32648201..32690145)
Genome browser
AA seq
1265 aa
AA seq
DB search
MSQIKRHNYSRTTSSGSSRMSSDGGGRPVKVGSLVEVIGKGHRGIVAYIGTTLFASGKWV
GVILEEPKGKNDGTVQGKRYFTCVENHGIFVRQSQIQLVDDGYDTTSPDTPEPITSKVLK
REIPEAVKANKVRGAKPKKTPAPRKTTVRKPKARPGVGQKVGSGSASAGEISSSEPSTPA
QTPLAAPMIPSPGTLPSPGAPPVPVLSKEEEALQAQVKDLEEKLETLRIKRAEDKAKLKE
MEKYKIQLEQLQEWRSKMQEQQNELQKQLKEAKKEAKEALEAKEHYMEEMADTADAIEMA
TLDKEMAEERAESLQLEVDALKEKVEELTMDLEILKHEIEEKGSDGAASSYHVKQLEEQN
ARLKEALVRMRDLSATEKQEHGKLQKQMEKKNFELETLRGQKENVQEELKMAERTIDELK
EQVDAALGAEEMVETLTERNLDLEEKVRELKEAVTDLEAINEMNDELQENARETELELRE
QLDLSAASVREAEKRVEAAQETVADYQQTIQKYRELTAHLQELNRELMSQQEATAEPQQQ
PAEMFDFKIKFAETKAYAKAIEMELRKMEVAQANRQVALLTSFMPESFLRHGGDYDCILV
LLLIPRLICKAELISKQAQEKFDLTENSLKRPGMRGAVGEQLSFAAGLVYSLSLLQSTLH
KYEHALNQCDVEVYKRVGSLYSEMCVHERSLDFLIDLLHKDQLDETVNVEPLTKAIKYYQ
HLYSIHLAEQAEDCTMQLADHIKFTQSALDCMAVEVGRLHAFLQAGEEETQLAVLLKDLD
TSCSDIRQFCKKIRRRMPGTDAAGIPTALNFGPQVSETLAESRRQLAWVNAVLQEVAAAG
AQLIAPLGEHEGLPTLKLEDMAFKAAEQIYGTQGINPNECLRQSCSVVIATMNKMATAMQ
EGEYDSEKPQSKMAPVEVRAAALRAEITDAEGLGLKLEDRETVIKELKKSLKIKGEELSE
ANIRLSLLEKKLDSASKDADERVERIQTVLNETQSQLKKKEKDFEETMDALQADIDQLEA
EKAELRQRINSQSKLAVEGLKGSPASGIAPIVTGGIMTEEQKGAVGVCAAAGVQMIDSPL
LTQQIEAQRLSIKHLKNENNILKAEKMRAQLASLPPLNVPKLSLREGSRPEVLSSALYRK
TDQLLETLLQMSANTKVVDITGKSPVSPGAQLLEQTARLQSLSETLDRLKDEVAEHVVSQ
RPGARVSSDFATFPCTSFVKAKEEKRRDEVLVGRVMMPCARGQEQVHQLVLSQSQLQRVH
HLLQT
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagataaagagacataattacagcaggaccaccagcagtggtagcagcaggatg
agttcagacggaggaggacggccggtaaaagtgggctctctggtagaggtcattggaaag
ggtcatcgtggcattgtagcctacattggcaccacactttttgcctcaggaaaatgggtg
ggggtgatccttgaggagcccaaaggcaaaaatgatggcacagtgcaaggcaagcgctat
ttcacttgtgtggagaaccatgggatatttgtgcgtcagtcccagatccagttggtggat
gatgggtatgacacaacgtcccctgatactcctgaacctatcacttctaaagtgcttaaa
cgagaaattccagaagccgtcaaggccaataaagtgcgaggagccaaacccaaaaagact
cctgctcctcgtaagaccacggtcaggaaaccaaaggcccggcctggagttgggcagaag
gtgggatcaggctctgcctcagctggagagataagcagcagtgaaccaagcacacctgcc
caaactcctttggctgctcccatgatcccttctcctggaacactcccctctcctggggct
ccacccgtcccagtcctgagtaaggaggaggaggctcttcaggcacaggtaaaagatctg
gaggagaagctggagactttgcgaataaagcgggcagaggacaaagccaagttaaaagag
atggagaaatacaagatccaactggagcagctgcaggaatggaggagtaaaatgcaagaa
cagcagaatgagctgcagaagcaactcaaagaagccaagaaggaggcaaaggaagctctg
gaggcaaaagagcattacatggaggagatggcagatacagcagatgctattgagatggct
acattggacaaggagatggcagaggagagggcggagtctttacagctggaggttgatgct
cttaaagagaaggtggaagaactgaccatggaccttgagattcttaaacatgagatagag
gagaaagggtcagatggagcagcatcaagttatcatgtgaaacaactagaagagcaaaat
gcccgtctgaaggaggccttggtcaggatgcgtgacctgtccgccactgaaaaacaggaa
cacggcaagctgcagaagcagatggagaaaaagaactttgagctggaaacactgaggggg
caaaaagaaaacgtgcaggaggagctgaagatggcggagaggaccatagacgagctcaaa
gagcaggtggatgctgctttgggagcagaggagatggtggagacccttacagagagaaat
ctggacctggaggaaaaagtacgggagctcaaagaggccgtaaccgacctggaggctatt
aatgagatgaacgacgagctacaggagaacgccagagagacggagctggagctgagggag
cagctggatctgagtgctgccagtgtaagagaggctgaaaaacgtgtcgaggcggcacag
gaaactgtggcagattatcaacaaactatccaaaaatacagagagctgacggcccacctg
caggaattgaacagagagctcatgagccagcaggaggccacagccgaaccacagcagcaa
ccagcagagatgtttgactttaagattaaatttgccgaaaccaaagcctatgcaaaggct
attgagatggagttgcgtaaaatggaggtggctcaggcaaacaggcaggtggcgctgctc
acctcctttatgcctgaatccttcctgagacatggaggagactatgactgcatcctagtc
ttgctgctcattcccagacttatctgcaaggcagagctgatcagtaagcaggcccaggag
aagtttgatctgactgagaacagcttaaagaggccaggaatgagaggagctgtgggggag
cagctcagctttgctgctggtttggtatactctctaagcctgcttcagtctacattgcac
aaatatgaacatgctctaaatcagtgtgatgtggaggtgtataagcgtgtaggttcactt
tactctgagatgtgtgtgcacgagcgctctctggacttcttaatcgatctgctgcacaag
gaccaactggatgagactgtgaatgtggagccacttaccaaagctattaaatactatcag
catctttacagtattcatctagctgaacaagctgaggactgcactatgcagctggctgat
catataaaatttacccagagtgctctggactgcatggcagtggaagtgggccgtctgcat
gccttcctacaggcaggagaggaggaaacacagctggctgtgctgctgaaggatctggac
acttcctgtagcgacatccgccagttctgcaagaagatccgacgccgcatgcctggcact
gatgcagcaggaatccccactgccctcaactttgggcctcaggtgagtgaaactctggcg
gagagcagaaggcagctggcctgggtgaatgctgtgctgcaggaggtggctgcagcggga
gctcagcttatcgctccactcggggaacatgaaggtctgccaacgctcaaactagaggac
atggccttcaaagcagccgaacagatctacggcacacaaggtataaaccccaacgagtgt
cttcgccagtcttgcagcgttgtcattgcaacgatgaacaagatggccactgctatgcag
gagggagaatatgactcagagaagccacagagcaagatggccccagtggaggtgcgggca
gctgcactaagggcagagatcacagatgctgaaggactcggccttaaactagaagataga
gagactgttatcaaagagctcaagaaatccctcaaaataaaaggtgaggagctgagtgag
gctaatatccgcttaagtctgctggagaagaagctagacagtgcctcaaaggatgctgat
gaacgagtggagagaatccagaccgttttgaacgagacgcagtctcagctaaagaagaaa
gagaaggactttgaagagaccatggatgctctacaggctgatatagaccagcttgaggca
gaaaaggcagagctgaggcagagaatcaacagccaatccaagctggccgtggaggggcta
aaaggaagtcctgcctctggtattgcacctattgtgactggtggaatcatgactgaggaa
cagaaaggtgctgtaggggtttgtgctgctgcaggggtgcagatgatagattctccattg
ttgacccagcagattgaagcacagagactcagcataaagcatctgaagaacgaaaacaac
atcctaaaggcagagaagatgcgtgcgcagttggcctctctgcctcctctgaatgtccct
aagctgagcctgcgtgagggcagtagacccgaggttctatctagtgccctctaccgcaaa
acagaccaactgttggaaacgttgctgcagatgagtgccaacaccaaagtggtagacatt
actggaaaatctccagtgagtccaggtgcccagctgctggagcagactgcgaggttacaa
tctcttagtgagactctggataggctaaaggatgaggtggctgagcatgtggtatctcag
agacctggtgctcgggtttcgtctgattttgcaactttcccctgcacctcgtttgtgaag
gctaaggaggagaaaaggagagatgaagtgttggttgggcgtgtaatgatgccgtgtgct
cgaggacaggagcaggttcatcagctagtactgtcccagtcccagctgcaaagagtgcat
cacctgcttcagacctaa
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integrated database retrieval system
