Trichomycterus rosablanca: 134315080
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Entry
134315080 CDS
T09921
Symbol
trim8a
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM8a
KO
K12001
tripartite motif-containing protein 8 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134315080 (trim8a)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134315080 (trim8a)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134315080 (trim8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_4
TRIM_CC
zf-C3HC4
zf-C3HC4_2
zf-RING_2
DUF3287
zf-RING_5
FliD_C
DUF3375
U-box
dCache_2
Motif
Other DBs
NCBI-GeneID:
134315080
NCBI-ProteinID:
XP_062852088
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All DBs
Position
5:32828641..32863073
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AA seq
564 aa
AA seq
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MSSTQASEMAESWKNCFEEELICPICLHVFVEPVQLPCKHNFCRGCISEAWAKDTGLVRC
PECNHTYNQKPNLEKNIKLTNIVEKFNALNAEKEPVIPQCILCRRGPAIPAQKVCLRCNA
PCCPSHIQTHLQQPSPNAGHMLVDVEDVRAWRCPQHDEYRLYHCEVEQVAVCQYCCFSRC
AASHGQAFCDIEVRQNDIRQMLMKQQDHIEDRVQDIEEQMYKLESDKRQVEDKVEQLKEE
VRVQYQKMQQLLEEDLGKTLEVLEKARVKFCQENSSQVLQLNEQHQEAKKLLSSVQVLFD
KADDINFMKNTKPVKILMDRSQTCTGSVLPPYKAGHLNSKSFLSEISKKEKNLRKMLEAP
FTAPSHFLQSVPVYPCSSAPEKRKHSSAFPESSAGFMESSSGSASKKQFLTSGSSLAEGL
PVAPCSSAQHNVSLNSGGSTGGGAQPVHHSSSVFSPAHYPNAGSSQQAVLPQYSGRKILM
CTMDNCYCSSMPSVSGHRAHPPYPRSSSFPWTQEFSHPLPSAPSMSQPLQGLSVRNWIDA
SQSHRHPDFYGLYGQSSTKHYVTS
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctacccaagcatctgagatggctgagagttggaagaactgttttgaagaggag
ctcatctgccccatatgtctgcatgtgtttgtggaacctgtgcagctgccgtgcaagcac
aacttctgtcgtgggtgtataagcgaagcctgggccaaagacacaggcctagtgcgctgc
ccggagtgcaatcacacttacaatcagaagcccaacctcgaaaagaacatcaagctgacc
aacattgtggagaagttcaacgccttaaatgctgagaaagagccagtcatccctcagtgt
atcctgtgcagacggggaccggcaattcctgcacagaaagtttgcctccgctgcaacgct
ccctgctgcccttcgcatattcaaacacacctgcagcagccctctccaaatgctggacat
atgctggtggatgttgaggacgtacgagcctggagatgccctcagcatgatgagtacaga
ttgtatcactgtgaggttgagcaggtggctgtgtgccagtactgctgcttttccagatgt
gcagccagccatggtcaggctttctgtgacattgaagtgcgtcagaatgacatacggcaa
atgctgatgaagcagcaggatcacattgaggatcgagtgcaagacatagaagagcaaatg
tacaagctggagtcggacaaacggcaggtggaggataaggtggagcagctaaaagaggag
gtacgtgtgcagtatcaaaagatgcagcagcttctcgaagaagacctagggaagactcta
gaagtgctggaaaaagcacgagtgaagttctgccaggagaattccagccaggttctgcag
cttaatgagcagcaccaagaggccaagaagctgctcagctccgttcaggtgctgttcgac
aaagcggatgacatcaactttatgaagaacacaaagcctgtgaaaattctcatggatagg
tctcagacatgtacaggcagtgtgctacctccctataaagcaggtcatcttaactcaaaa
agcttcctctctgagatctccaaaaaggaaaagaacctacggaaaatgctggaagcaccc
ttcactgctccttcacactttctccagagcgttcccgtgtacccgtgcagctcggctccg
gagaagcgcaaacactcgagcgcctttcccgaaagcagcgcaggcttcatggaatcctct
tcaggctcggcgagcaagaagcagttcctgacttccggttccagtttggctgaagggctg
cctgtggccccctgcagctccgctcagcacaacgtgagccttaacagcggcggtagtacc
ggaggcggcgctcagcctgtccatcattctagctctgtctttagtcctgcccactacccc
aacgctggctcctcccagcaggccgtgctgcctcagtatagcggccgcaagatcctcatg
tgtacgatggacaactgctactgctccagtatgccctctgtgtccggtcaccgcgctcac
ccgccctacccccgctcgtcctcgttcccctggacgcaggagttttctcaccccttgccc
tcggctccttccatgtcccaaccactacagggcctttctgtgcgcaactggatcgacgcc
tcgcagagccacaggcaccccgacttctacgggctgtacggccagtcttctactaaacac
tatgtcactagttaa
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