Trichomycterus rosablanca: 134315085
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Entry
134315085 CDS
T09921
Symbol
gabrb1
Name
(RefSeq) gamma-aminobutyric acid receptor subunit beta-1
KO
K05181
gamma-aminobutyric acid receptor subunit beta
Organism
trn
Trichomycterus rosablanca
Pathway
trn04080
Neuroactive ligand-receptor interaction
trn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
134315085 (gabrb1)
04082 Neuroactive ligand signaling
134315085 (gabrb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134315085 (gabrb1)
Ion channels [BR:
trn04040
]
Ligand-gated channels
GABA-A
134315085 (gabrb1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
134315085
NCBI-ProteinID:
XP_062852095
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All DBs
Position
5:33106743..33152513
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AA seq
481 aa
AA seq
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MWRAGERWFPVLLGFMPMLITVELGRGPVSHSVNEPSNMSYVKVTVDKLLKGYDIRLRPD
FGGPPVDVVMSIDISSIDMVSEVNMDYTITMYFQQSWRDKRLSYTGIPLNLTLDNRVADQ
LWVPDTYFINDKKSFVHGVTVKNRMIRLHPDGTVLYGLRITTTAACMMDLRRYPLDEQNC
TLEIESYGYTTDDIEFYWQKGSSVTGVENIELPQFSIIGYETLSKKAVFATGSYPRLSLS
FKLKRNIGYFILQTYMPSNLITILSWVSFWINYDASAARVALGITTVLTMTTINTHLRET
LPKIPYVKAIDIYLMGCFVFVFLALLEYAFVNYIFFGRGPHLQKKVAEKAAKSNNEKSRL
ESNKVQMDPHGNIALTNLDLRLTGAEMLGGLGDPRNTMFSYDSASIQYRKPLSGCDLYGR
PTPSLERPIKHKKSRLRRRASQLRMKIPDLTDVNAIDKWSRVIFPITYTFFNLVYWLYYV
H
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtggagggctggagagcgctggttcccagtgctgctgggtttcatgcccatgctgata
acagtggagctcggccgcggtccagtctcacacagtgttaacgaaccaagcaacatgtca
tatgtcaaagtcacagttgataaactgctcaaaggctacgacattcggctcaggccagat
tttggaggtcctccggtggatgttgtgatgagtattgatatctctagtatcgacatggtg
tctgaagtgaacatggactacaccatcaccatgtatttccagcagtcatggcgtgataaa
cgcttgtcctacacagggatccctctgaatctgacgctggataatcgtgtggccgatcag
ctctgggttcctgacacttacttcataaacgacaagaaatcctttgttcacggggtcact
gtcaagaaccgcatgattcgcctgcatccagatggaactgttctctatggactcaggata
actacaacagcagcctgcatgatggacctgcggagatacccactggatgagcagaactgc
accctggagatagagagttatggctacaccacagatgacattgagttttattggcagaag
gggagctctgtaacaggggtggaaaacatcgaactgccacagttttctattattggctat
gaaactttgtctaagaaggcggtgtttgccacagggtcataccctcgtctgtccctgagt
ttcaagctgaagagaaacatcggctatttcatcctgcagacctacatgccctcaaacctg
atcaccatcctgtcctgggtttccttctggatcaactatgatgcctctgcagcacgggta
gctctaggaataacaactgtactaaccatgactacaatcaacacccatctgcgggagacg
ctgcctaagatcccctacgtaaaggcaattgatatctacctgatgggctgcttcgtcttt
gtattcttggctctgctcgagtatgcatttgtgaactacattttcttcggccgaggtcct
cacctgcagaagaaagtggcagaaaaagctgctaagagcaacaacgaaaagagcagacta
gagagcaacaaggtccagatggacccccatgggaacattgccctcaccaaccttgacctt
cgcctcactggggctgagatgctcgggggtcttggtgaccctcgaaataccatgttctcc
tatgacagtgccagcatccaataccgcaagcctctgagtggctgtgacctctatggacga
ccaactccttcccttgagcggcccatcaagcacaagaaaagccgcttgaggaggcgggcc
tctcagcttaggatgaaaattccggatctaacagatgtgaatgccattgacaagtggtcg
cgggtcattttcccaatcacttacaccttcttcaacctggtctactggctttactatgtt
cactag
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