Trichomycterus rosablanca: 134315174
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Entry
134315174 CDS
T09921
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134315174 (btaf1)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
134315174 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
Vac14_Fab1_bd
TPR_Trm732_C
HEAT_2
TOR1L1_N
HEAT_EZ
ARM_ECM29
Arm
Motif
Other DBs
NCBI-GeneID:
134315174
NCBI-ProteinID:
XP_062852263
LinkDB
All DBs
Position
5:43693443..43751012
Genome browser
AA seq
1861 aa
AA seq
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MAVSRLERLFILLDTGTTPVTRKAAAQQLGDVVKLHPHELNNLLSKVLTYLRSPNWDTRI
AAGQAVEAIVKNIPEWNPAPKPKEESCAEDMSPEDSTSDRLSFYRFDISRLLRHGVSLLG
SAGAEFEVQDDKSGEVDPKERLARQRKLLQKKLGLDMGAAIGMDTDELFNDDDLDYTCSS
NLNRAHAVKGPVFQGSRSQTSMQAAEFIDSEFRPGMSNRQRNKAKRMAKLVAKQRSRDLD
PNEKSNDSFEGEPEEKRRKTTNVLIEQPATENKVLIDNIPDNSSLFEETQEWPLESFCEE
LCNDLFNPSWEVRHGAGTGLREVLKCHGEAGGKMVDSTSEQLIQQHQEWLEDLVIRLLCV
FALDRFGDFVSDEVVAPVRETCAQTLGVALRHMTESGVTMTVDVLLKLLTEDQWEVRHGG
LLGIKYALAVRQDLIPLLLPRVLPAITEGLQDLDDDVRAVAAASLIPVVKGLVQLQPAKV
PFIVNTLWDALLELDDLTASTNSIMTLLSSLLTYPQVLQCSMQQSLTVLVPRVWPFLRHT
IASVRRAALETLFTLLSKADQTCAMWLNPILQDMLRHIFQSCILESNQEILDLIQKVWGE
LLRQAPQQYVVAASCPWMGAWLCLMMQAAHIPIDLNMLLEVKSRSKEKAGGKSRQGGLQV
KETVQEYMGGSDTITEDQATRDYVVTRARLMAAKLLGTLCSSICDPRLNSATQEIRPAES
LAQLLLFHLNSKSALQRIAVSMVLCEWASLQKECEVVSSVVQPRLLAILSEHLYYDEIAI
PFTRMQNECKQLIALLADAHIDVREKLDCSVFTIDQAHELVTTIFSEATSSLNLKSRQLQ
PLDSKRQQTSSTVAETSAEWQQLHLRVHTYAACAVVALAALPEKLNPVVRPLMEAVKKEE
NVLVQGYAASSIARLLQLCTGRTPCPNSKIIKNLCSSLCLDPMLTPNAECPVPPHTPSTQ
DSGKASMSEKDGLHHMVNKTKGIITLYRHQKAAFAITSKRGPAPKLQKSSTNDLPQSSFI
STETDESKRPSLIQRRGAEFSLMTMARHFGSELTTSLPYLWESMVGPLKALMDSQVFDSQ
QLLEKGDSVAQELVNSLQVLEVTTVAMTQELRSQLLEQLPLLCMCLHHPYTSVRHMAARC
VGVLSKIATMETMNIFLERVLPWLGAIDDCTKQEGAIEALACVMEQLDVDIVPYIVLLVV
PVLGRMSDLSDSVRFMATQCFATLIRLLPLEAGIPDPPSMSEDLIRQKARERHFLEQLLD
SRKLENYKIPVPIKAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDH
YLRAQEYAKTKASDCSPLPSIVVCPPTLTGHWVDEVGKFCAKEFLNPLHYTGPPTERARL
QHQVKKHNLVVASYDVVRNDIDFFKNVKFNYCILDEGHVIKNGKTKLSKAIKQLAANYRV
ILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDAKSSSREQEAGVLAM
EALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSPLQVQLYEDFAKSRAKVSVDDVIS
TAAQDEEDKPKLKATGHVFQALQYLRKLCNHPALVLTPQHPEHKRISEQLATQNSSLRDI
QHAPKLSALKQLLLDCGLGSTGSSDVGTEAVVAQHRVLIFCQLKSMLDMVEHDLLKPQLP
SVTYLRLDGSVPAGHRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNP
MRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANTVISQENASLQSMG
TEQLLNLFTLDKGDKADKSEAASSLSGKSSMKSVLDGLGELWDQQQYEAEYDLDSFMHSL
R
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atggctgtttcgaggcttgaacgtctgttcattttgctggacaccggaacgactcctgta
acaagaaaagccgccgctcaacagcttggagacgtggtcaagctccatccacacgagctc
aataacctgttatcaaaggttttaacgtatttaaggagtcctaactgggacacacgaatt
gcagctggacaggcagtcgaggccatagtaaaaaatattccagaatggaacccagcgcca
aagccaaaggaagaatcttgtgcagaggacatgtctcctgaggacagcacttcagacaga
ctgagtttctacaggtttgacatttcccgcttgctcagacatggcgtgtccctgcttggg
tctgccggtgcagagtttgaagtacaggatgacaagtcaggtgaggtggaccctaaagaa
cgtctggcacgacagagaaagctcctgcagaaaaagctgggtctggacatgggtgctgct
ataggcatggatacagacgaactgtttaatgatgacgacctggactacacctgttcctct
aatttaaacagagcgcatgctgttaaagggcctgtgtttcagggttcacgcagtcaaaca
tccatgcaggcggcagagtttatcgactccgaattccgaccaggcatgagcaatcggcag
agaaacaaggctaaaaggatggccaagctggtagcaaagcagaggtcaagagatctggat
cctaatgaaaaaagcaatgatagctttgaaggagaacctgaagagaaacggcggaaaacc
acaaatgtactcatagagcagccagctactgaaaacaaagtcttaatcgataacattcct
gataattccagcttgtttgaggagactcaagagtggcccctggagagtttctgtgaagag
ctttgtaatgacctgttcaatccatcctgggaggtccggcacggtgctggtacaggcctg
agggaggtgttaaagtgtcatggtgaagcaggagggaagatggtcgatagcacttcagag
cagttgatccagcagcatcaggagtggctggaagacctagtcattagactcttgtgtgtc
tttgctcttgatcgttttggtgactttgtatctgatgaggttgttgcaccagtaagagag
acgtgtgcacagacgctaggcgtggcattgagacacatgactgaaagcggcgttaccatg
actgttgatgtgctgttgaagctgctgactgaagatcaatgggaggttcggcatggagga
ctattgggcatcaaatacgcccttgctgttagacaggatcttattcccctactgcttcct
cgagtacttcctgcaatcactgaggggcttcaggacctggacgatgatgtgcgtgcagta
gccgctgcttctctgatccctgtagtgaagggacttgtgcagctacagcctgctaaggtt
cctttcatagtgaacactctgtgggatgctttgttagagctggacgacctcacggcttct
acaaacagcattatgaccctcctgtcatccctgcttacatatcctcaggtgcttcagtgc
agcatgcagcagtctttaacagtcctggttccccgggtgtggcctttcctgagacacacc
attgcttctgttcgacgtgctgccttagaaaccctctttacgctgctgtccaaagctgac
cagacttgtgccatgtggctgaaccccatcctccaagacatgctgagacacatatttcag
tcctgtattctagagagcaaccaggagatactagacctcatccaaaaggtgtggggagag
ctgctacgccaggctccacaacagtacgtggtagcagccagttgtccgtggatgggcgct
tggctttgtttgatgatgcaagcagctcacattcccattgacctcaacatgctgctggag
gtcaagtctcgctccaaggaaaaggcaggtgggaaatctcggcaaggcgggctgcaggtg
aaggaaaccgtgcaggagtacatgggtggatcggatacaatcacagaagatcaagccacg
cgagactacgtagtgacccgagcccggcttatggctgccaagctgttgggaacgctgtgc
agctctatctgtgacccacgtcttaacagcgccactcaggagatcaggccagcagagtcg
ctggctcagctgctgctctttcacctcaattcgaagtcggctctgcagcgcatcgctgta
tccatggtgctttgtgagtgggcctctctgcagaaggagtgtgaagtggtgtccagtgtt
gtgcagcctcgcttgctagccatcctgtcagaacatctgtactatgatgaaattgccatc
ccctttacccgaatgcagaatgaatgcaagcagctcattgcactgctcgctgatgcccat
attgatgtcagggagaaactcgactgcagtgtttttaccatcgatcaggcccatgaactg
gtgaccactatcttttccgaggccacatcgtctctaaacctaaagtctcggcagcttcag
ccgttggacagtaagcgacagcagacgtcctcaacggtggcagagaccagtgctgagtgg
cagcagttgcatctacgtgtgcacacttacgccgcgtgtgccgtggtggctctggcagca
ctgcccgaaaagctcaaccctgtagtgcgcccgctcatggaggcagtcaagaaggaagaa
aacgtgctggtgcagggatatgcggcctccagcatcgcccgactgctgcagctctgcacg
ggtcgcacgccctgccctaactccaaaatcatcaagaacctatgcagctctttgtgtctg
gaccccatgcttactcctaatgcagaatgccctgtaccaccacacacaccctccacacag
gatagtgggaaagccagcatgtctgagaaagatggcctgcaccacatggtgaacaagaca
aaaggcatcatcactctgtaccgtcaccagaaagcagcttttgcaatcaccagtaaaaga
ggccctgcccccaaactacagaaatcctcgaccaatgacttacctcaaagcagcttcatc
tccaccgagactgatgagagtaagaggccgagcctcattcagaggagaggtgcagagttc
tcactgatgacaatggctagacactttgggtctgagctgaccacttctttgccttatctc
tgggagtcaatggttggcccattaaaagcactgatggactcacaggtttttgattctcag
cagctcttggagaagggtgactctgtagcccaggagctggtgaactctctgcaggtgttg
gaggtcactacagtagccatgactcaggagctcaggtctcagctgttggaacagttgcct
ctgctgtgtatgtgtctccatcacccgtacacatctgtccgccacatggctgctcgctgt
gttggtgtgctcagtaagattgccactatggaaacaatgaacatctttttggagagagtg
ctgccatggctgggtgctattgatgactgcaccaaacaggagggagccatcgaggccctg
gcttgtgtgatggagcagctggatgtggacatcgtgccctacattgtgctgttggtagtg
cctgtgttgggccggatgagtgacctcagtgacagtgtgcgctttatggccacgcaatgt
ttcgccacccttataagactgctgcctctggaggctggcattcctgacccacccagcatg
tctgaggatcttattcgtcaaaaagccagagagcgtcacttcctggagcagctgctggat
agcaggaagctggagaactataagatccctgtgcccatcaaggcagaactcaggaaatac
cagcaggatggagtgaactggttgtcattcttgaataagtacaagctgcatggaatcctg
tgtgatgacatgggtttgggtaaaaccttacagtccatctgcattcttgctggagaccac
tacctcagggcacaagagtatgccaaaaccaaggcttcagactgttctcctctaccctcc
atagtagtttgcccccctactctgacaggtcattgggtagacgaagtgggcaagttttgc
gctaaggagttcctaaaccctctgcactatacagggccgcctacggagagagcacggcta
cagcaccaagtgaaaaagcacaaccttgtggtagcatcatatgacgtagtgcggaacgac
attgacttttttaaaaatgttaaatttaattactgtatccttgatgaggggcatgttatt
aagaatggaaagaccaaactatccaaggctattaagcagctggctgccaactacagagtt
attctgtcaggaactccaattcagaataatgttctggagctgtggtctctctttgatttc
ctgatgccgggctttttgggtacggaacggcagtttgctgcccgctacggaaagcccatc
cttgctagtcgagatgcaaagagctcctctcgggaacaggaagcaggggttttggctatg
gaggctctgcatcgacaggttcttcccttcctcctaagaaggatgaaggaggatgtcctc
caagatctgccacccaagattatacaagactactactgcaatcttagtcccttacaggtt
cagttgtatgaggactttgctaagtcccgagccaaggtgagtgtggatgatgtcatctcc
actgcagcacaggatgaagaggataaacccaagctaaaggccactggacatgtgttccag
gccctgcagtacttgaggaaactctgtaaccatccagcactggtcctgacccctcagcat
cctgagcacaagcgcatcagtgaacagctcgccacccaaaattccagcctccgagacatc
cagcatgcccccaagctctcggctctcaaacagttgctgttggactgtggtctgggctcg
actggcagctcagacgttggcacagaggctgtggtggctcagcaccgtgtgctgattttc
tgccagctaaaaagcatgctggacatggtggagcatgacctgctaaagcctcagctgccc
agcgtgacctatctgcggttggatggcagtgtgcctgcaggccatcgtcactccattgtc
tcaaggtttaacaatgacccatcaatagatgtcctgctactaaccacacacgttggtggt
ctaggcttgaatctgacaggagcagatactgtggtgtttgtagaacatgactggaatcca
atgagagacctacaggccatggatcgagctcacagaataggacagaaacgtgtcgtcaat
gtgtatcgtctgatcacgcggggcactctggaggagaagattatgggcctgcagaagttt
aagatgagcatagctaacactgtgatcagccaggagaacgccagcctccagagcatgggc
acagagcaactgctcaaccttttcactctggataagggtgataaggcagataagagtgaa
gctgcatcctctttgtctggaaagtccagtatgaaatcagtgttggacggacttggggaa
ctgtgggaccagcagcaatacgaagcagagtacgacctggatagcttcatgcactcgttg
cgctga
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