Trichomycterus rosablanca: 134315202
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Entry
134315202 CDS
T09921
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134315202
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134315202
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
134315202
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
HECT type E3
134315202
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
134315202
NCBI-ProteinID:
XP_062852312
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All DBs
Position
5:complement(47729511..47772261)
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AA seq
1069 aa
AA seq
DB search
MLCWGGSARGQLGLGVSEAAVFEPRSCSVFDGRGLKEVACGAQHSIFLMHDGSVYTCGSN
SHGQLGHEKSGAKPELVGALDAQKIASVACGQAHSLALSEKGQVFAWGGGEGGQLGLGTV
EEAVRVPRLIKKLCEHRISQVMCGNQHCIALSKDGQLFTWGQNSSGQLGLGKGEPNSLSP
QPLKSLSGIPLAQISAGGDHSFALSLSGAVFAWGRNSAGQLGLNDEEDRAVPCHIKFLRS
QKVVYISCGEEHTAALTKDGGLFTFGNGSRGQLGHDSINNEPLPRRVLELMGTEVSQIAC
GRNHTLAFVPSTGLLYAFGCNAQGQLGLGTRGNVKIPMPVRNIFPRYLDTKQPGVSRIHC
GGDQSFLVLSHDKCCPEDFRIINTSRSISLINKESLNSWRMKLVDNADSSITNDIILLLS
STACWNASFLDQSDDGHFKTNPKVPGIDLNSVRLLFEILMKPAYSRLLEQTTKSFESLLI
PQLPCSPPDVEAMRIYLILSECPALHDSKNYISLTIPLAMAILRLDANPSKVLDNWWSLL
DCEVFSRLVEMYKSIVVFLLTGGKALLIPVFLESYINATLKLLEKLHKVNQKAHHVEYSS
FYIPDITSLVDIQEDYLKWFLSKAEIKLRSHPVQGSFMLCAYPFILNAQAKTTMLQTDAE
LQMQQEGPGLDSQVERSGAFLWSSGFLLQYKDMQMAVSGANLHNVFMLLTLEPLLAQNPF
LVLHVRRDHLVSDALRELTVYNDVDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELMDP
VYGMFTHYPESNLLWFSDKCFVEHNWFHLIGIICGLAIYNSTVVDLHFPLVLYKKLLDVT
PVLDDLKELSPTEGRSLQQLLDYKGDNIEDTFCLNFAISREYYGVTEVKELIPGGENITV
DKSNREEFVQSYLRYVFTDSVKELYSAFASGFLKVCGGRILSLFQPSELMAMVVGNSSYN
WEELEKNASYKGEFSASHPTVQMFWEVFHEFPLEKKKQFLLFLTGSDRIPIHGMSSLRIV
IQSTSAEENFLPVAHTCYNLLDLPCYRSKETLRSRLTRAIEQYEGFSLV
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgctgtgctggggcggttcagctcggggtcagctgggcctcggcgtgtcagaggctgct
gtgttcgagccacgaagctgcagcgtgtttgatggaaggggactgaaagaggtggcctgc
ggcgcccaacactcgatcttcctgatgcatgatgggagtgtgtacacttgtgggtccaat
agtcatggtcagctgggtcatgagaagtctggagccaagccagagctggtgggggcgctg
gatgcccagaagattgcaagtgtggcgtgtgggcaggcccactctttggcactgagtgaa
aaggggcaggtgtttgcatgggggggcggcgagggcgggcaactcggcctcggcacagtg
gaggaagccgtccgagtgcccaggttaataaaaaaactgtgcgagcatcgtatttcacaa
gtcatgtgcggcaaccagcactgcatagcgctctctaaagatggtcagctcttcacatgg
ggtcagaactcaagtggtcagcttggattgggaaagggggagccgaactctctgtctcct
cagcccctaaagtctcttagtgggatcccattggctcagatcagcgctggaggagaccac
agttttgccctgtctctgtccggggccgtttttgcctggggcaggaacagtgcaggacag
ctggggctcaacgatgaagaagatcgggctgttccctgccacatcaaattcctgcgctcc
cagaaggtggtctacatcagctgtggggaggagcacacagccgccctgaccaaggacgga
ggcttgtttacatttggaaatgggtcaagaggacaactgggccatgactccatcaataat
gagcctctgccacgcagggttctggagcttatgggcacagaggtatcccaaattgcatgt
ggcaggaaccacaccttggcttttgtaccctccaccggtctgctgtatgcctttgggtgt
aatgctcagggtcagcttggcttagggacaagaggaaatgtcaagatccccatgccagtt
cgaaacatcttccctcgttatctcgatacaaaacagcctggcgtcagcaggattcactgc
ggaggtgaccaaagcttcctggtgctgtcacatgacaagtgctgcccagaagatttccgc
attatcaacacatccagaagtatctctctgattaataaggaaagtctaaacagttggaga
atgaagctcgtggacaacgctgactccagcataacgaatgacataattctgctcttgtca
tcaactgcatgctggaatgccagctttctggaccagagtgatgatggccattttaaaacc
aaccccaaagtgcctggcatcgacctgaactccgtcaggcttttgtttgagatactgatg
aaaccggcttactcacggctgctggagcagaccacaaagagctttgagagtcttctgatt
cctcagcttccctgttctcctccggatgtagaggccatgcgcatctacctgatcctctcc
gaatgtccagctctgcatgactccaaaaactacatctccctcaccatccccctggctatg
gccattctcagactggacgccaaccccagcaaagtgctggataactggtggtcactgctt
gactgtgaggtcttctccagactggtggagatgtacaagagtattgtggtgtttctgctc
actggtggcaaggcgcttctcatccctgtgtttctggagagctacatcaatgctacactc
aaactgctggagaaactgcacaaggtgaaccaaaaagcccatcatgtggagtatagcagc
ttctacattcctgacatcaccagcctggtggacatccaggaagactacctcaaatggttc
ttgagcaaagctgagatcaaactgagatctcatccagtgcagggctctttcatgttatgt
gcctatccattcatattaaacgctcaagccaagacaaccatgctgcagactgatgctgag
ctgcagatgcagcaagaaggtcctgggttggattcccaggtggagcggtccggggccttt
ctgtggagctccggttttcttctacagtacaaagacatgcaaatggcagtgagtggtgcc
aacctgcacaacgtcttcatgctgttgacactagaacccttgttggcacaaaaccctttc
cttgtactccatgtgcgtcgggatcacttggtcagcgatgcactgcgtgagctgaccgtc
tacaatgacgtggacctgaaaaagcccttaaaggtcatctttgacggagaggaggcggtg
gatgcaggaggagtcactaaggagttcttcttgttgctgcttaaggagctgatggatcca
gtctatggcatgtttacccattacccagagtccaacctgctctggttctctgataaatgt
ttcgtggaacacaactggttccatttgatcgggatcatctgtggtctggccatctacaac
tccaccgtggtggatctgcacttccctcttgttctttataagaagcttctagatgtgact
cctgttctggatgacctgaaggagctgtcgccaaccgagggcaggagtctccagcagctg
ttggattataagggagacaatattgaggacaccttctgtctcaactttgctattagccga
gagtattacggggtaactgaggtgaaagagctgatccctggtggagagaacattaccgtg
gataaatccaacagagaggagtttgtacagtcgtacctgcgctacgtgttcaccgactca
gtaaaggagctgtactcagcattcgccagcgggttcttaaaggtgtgtggtgggcggatc
ctctccctgtttcagccctctgagctcatggccatggtggtaggaaacagcagctacaac
tgggaggagctggagaagaatgcgagctacaaaggcgagttctcggcctcgcaccccaca
gtgcaaatgttttgggaggtgttccatgagtttcctttggagaagaaaaagcagttcttg
ttgttcctgacgggcagcgaccggattcccatccacggcatgtccagcctgcgcatcgtc
atccagtccacgtcggccgaggagaacttccttcctgtagctcacacctgctacaacctg
ctggacctgccgtgctacaggagcaaagagacgctgcgctccaggctcacccgcgccatc
gagcagtacgagggattcagtctggtctga
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