Trichomycterus rosablanca: 134315249
Help
Entry
134315249 CDS
T09921
Name
(RefSeq) sorbin and SH3 domain-containing protein 1 isoform X1
KO
K06086
sorbin and SH3 domain containing protein 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn03320
PPAR signaling pathway
trn04520
Adherens junction
trn04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134315249
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
134315249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_9
SH3_1
SH3_2
Sorb
Motif
Other DBs
NCBI-GeneID:
134315249
NCBI-ProteinID:
XP_062852398
LinkDB
All DBs
Position
5:complement(52381681..52468515)
Genome browser
AA seq
1396 aa
AA seq
DB search
MKSSPDLVPTESDPDRVCKGKGVVTLSTTLMHSEDEDRGPQEPEENRAQSESKHSGSFNT
SYEFLLTAVNGGATETRPTENGNDLKEDPTRVEVPEGASPDDGPLSASAPTLCPPSEPQQ
PSTDSVETWDSSCGFHSPPAPQMEGRNLMITVHPASPVHLEKPRVPVRNTEKSKDWYRSM
FRQIHRVPEPVEENPYRPTYIFPESSDLPCKSSRDDWRSDYGQTVPRSKSAVDMSSSQSR
RRVSVPARTSSLRPERNEWEPPDKKVDTRKYRAEPRSIFEYEPGKSSVLRTERPDVSPEE
VDLENEPWYKFYSEMDFGRTSTPSFSPLETASDLQQYSGCKPSPSAAGKDPGSVGAEHPS
PECDRHIYKSVLEGGDIPLQGLRALNKRHPSTSSKGGNGCVISACSSVNARSGLTTNTLG
TQNKSKNSLTAAKACIPQILPSKFKLCPAADEGQEGRTEAAARPKAHSGEDPGVSENGDF
TDGNDEQVTEIKNGGVNGAARSTSEFTALYRNMHHIERPRSLGFSPNASVRSLASAFQKP
GDGIAADRGVDVPRHAVSCRVMEFERIIQHSSTAPRRSASMPTLHSSAPHSPTAGACLLQ
SALSAESLVAPGTAHSVNCPLHGEDRAPKDGGSFSEAERCADPDVQNQNRSSRTEQTDCV
QNLITVTRTPTTRHHHDHHHHHHEHLPFHQFHLKPSKCKGSCPASYTRFTTILRHERQQA
STSIPERRSGPPANLLLMGPAPFSLQKTLHTLQAKKTLSASKGLARDVAEGRAVSSRPRP
VIPQRLSSLEVLERLGNGEGTVEDAECSDDNRNHCGDSELSLPSLSHADLDGNPEDVTRR
RYGDKEKILEEQRRLKREQEEADIASRRHAGLVLSHQQFITNDRFGDLLTINDSDKRKSG
PERTPALALFNFKAESLKELPFQKGDIVYILRQVDQNWYEGEHHGRVGIFPRNYVELLPP
TEKAQPKKSAPVQVLEYGEAMARFNFNGDTAVEMSFRKGERITLIRRVDENWYEGKISGT
NRQGIFPVTYVEVHRKPRVKNGVDYPDPPVSHSPHRSTNASPLPVRLRTAPLPLPRSPCR
SVSPEVHAVSNEWISLTVGGLSSSPPAAPTPPLPPLPSAGYRLGEYLPPSHSASPVPLIS
GSPYCVSPMASPSSSPLPPPHPPRPSSATPFLTFTPPQGEDFLLFPPSPRLSRSLSPCGG
AGLEGWLSGGGRLDVELQEGDGAELDRVSGTRKAPGDWRSSPAKPLKSESDYHGRSSRSP
VMLFDIQDNNMNANSFTEAVCNEIMNIAETSVRYCSTLSRPLDSAHRLMPHLSKHSLIIS
QQPQSQSSSPEPGRLSCGIFQALYSYVPQNDDELELQEGDLVNVMEKCDDGWFVGTSKRT
KQFGTFPGNYVKAVNL
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atgaagagctccccagacctggtgcccacggagtcggacccggaccgtgtctgtaagggg
aagggcgtcgtgaccctaagcaccacgttaatgcacagtgaggatgaagatcgaggccct
caggagcccgaggagaaccgagcccagagtgagagtaaacactctgggagcttcaacact
tcctatgaattcctcctcacggccgtcaacggaggcgccacagagacccgtccgaccgag
aacggaaacgatttaaaggaagatccgacgcgggtcgaggttcctgaaggcgccagtccc
gatgatggcccgttatctgccagcgcgcccaccttgtgcccacccagtgaaccgcagcag
cctagcacagactcagtagagacgtgggacagctcgtgtgggttccattctcctcccgct
ccacagatggaaggtagaaacctgatgatcacagtccacccagcttcacctgttcacctg
gagaagcccagagtccctgtacggaacacagaaaagtccaaggactggtacagatccatg
ttcagacagatccacagagtcccagagcctgttgaagagaacccataccgccccacctac
attttccctgagagcagtgatttaccatgcaaaagcagcagagatgactggcggagtgat
tatggacaaaccgttcccaggtctaaaagtgcggtggacatgagcagctcacagtcgaga
cgaagggtttcggttccagcccggacgtcgtctctacgacctgaacggaacgagtgggag
cccccggacaagaaggtggacaccaggaagtaccgggccgagcccaggagcatcttcgag
tacgagccggggaagtcgtcggtgctgaggacagagaggccggacgtaagcccagaggaa
gtagatttagagaatgaaccgtggtataagttctattctgagatggactttggcagaacg
agcaccccctctttcagccccttggagacagcgtccgacctgcagcagtattcgggatgt
aaaccgagccccagcgcggcggggaaggaccccggctcggtcggcgccgagcacccgtcc
ccggagtgcgaccggcacatttacaagagcgtcctggagggcggagacatcccgctgcag
ggcctgcgagcgctgaacaaacgccatcccagcacctcctctaaaggtgggaacggctgt
gtgatttcagcatgctcctctgtaaacgctcgctcaggtctcaccactaacacactaggt
actcagaacaagtcgaaaaactccctgaccgccgccaaagcctgcattccccagatcctt
ccctccaagttcaagctctgccccgccgccgatgagggccaggagggcaggaccgaggcc
gcggcacggcccaaggctcacagcggtgaggatcctggcgtctcggaaaacggagatttc
acagacgggaacgacgagcaagtgacggagattaaaaacggaggggttaacggggccgca
aggagtacgtccgaatttaccgccctgtacaggaacatgcaccatatcgagaggcccaga
tcgctgggcttcagtcctaacgctagcgtgcgcagcctggcgtcggcctttcagaagccg
ggcgatggcatcgccgctgatagaggggtggatgtcccgcggcacgccgtgagctgtcgg
gtgatggagttcgagcgcatcatccagcactccagcaccgccccgagacgctccgcttcc
atgcccactcttcacagtagcgcccctcatagccctaccgccggtgcctgtctgctccag
tcggctctgtcggcggagtctctggtggccccggggacggcacattcggtgaactgtcca
ctgcatggagaggaccgagctcctaaagatgggggttcattttcagaagcagaacgatgt
gcagatccagatgtgcagaaccaaaaccgttcctcgagaacagaacagacagactgtgtg
cagaatctcatcacggttaccagaacaccaacaacaagacatcatcatgaccaccaccac
caccatcatgaacatctccccttccaccagttccaccttaaacccagtaaatgtaaaggt
tcctgccccgcctcttacacccgcttcaccaccatcctcaggcacgagcgccagcaagcc
agcacttccattccagagagaagatcaggacctcctgcaaacctgctcctgatgggtccg
gcgccgttctccttacagaaaaccctgcacaccctccaggccaaaaagactctctcggct
tctaagggtttggcacgagacgtggcagagggtcgagcggtgtcgtccaggccgaggccc
gtcatcccccagcgcctgtcctctctggaggtgctggaaaggctggggaacggcgagggg
accgtcgaagatgccgaatgctcggacgacaataggaaccactgtggagattctgaactc
tcactgccgagcctcagccatgcggatctcgatgggaatccagaagacgtaacccgcaga
cgctatggagataaagagaaaatcctggaggagcagcggcgtctgaagcgggagcaggag
gaggcggacatcgcgtcacgcaggcacgccggcctcgtgctatctcaccaacaattcatc
accaacgatcgcttcggagacctgctcaccatcaacgactcggacaagaggaagtccggc
ccagagaggactcctgctctggccctgttcaacttcaaagcagagtctctaaaggagctg
ccctttcaaaaaggagacatcgtgtacatccttcgtcaggtggaccagaactggtacgaa
ggagagcatcatggaagagtcggcattttccctcggaactacgttgagctcctaccacct
acagaaaaagcccagccgaagaagagcgccccggttcaggtgctggagtatggagaggcc
atggcacgcttcaattttaatggagacaccgcagtcgaaatgtcattcagaaagggggag
cgcatcacattaattcgacgtgtggatgaaaactggtatgagggcaaaatttctggcacc
aaccggcaggggatcttccccgtcacttatgtggaggttcataggaaaccccgcgtgaag
aacggggtggattatcctgatcctcccgtcagccattcaccacaccgcagcacaaacgcc
tccccgctgccggtccgtctcagaactgcccctcttcctctgccacgctcaccgtgccgc
tctgtctcccctgaggtccacgccgtgtcaaacgagtggatttccctcacggtgggcggt
ttgagctccagccctccggcggcgcctacccctcctctgcctcctttgcccagtgccggc
tatcgtttgggcgagtacctgccgccgtcccactctgccagccccgtacccctgatcagc
ggcagcccgtactgcgtctcccccatggcctcgccgtcctcctcgcccctgcctcctcca
cacccgccccgacccagctctgccactccgttcctcaccttcacccctccgcaaggggag
gacttcctgctcttccctccttcgccccggctgtcgcgcagcctgagtccgtgcggtggg
gccggtttggaaggatggttgagtggaggaggaaggctggatgtcgagctacaagagggt
gacggggcagagctagacagggtcagcggcacccgcaaggcgccgggcgactggcgcagt
agtccagcaaagccactgaagagtgaaagcgattaccacgggagatcctccagaagtccg
gtcatgctgttcgacatccaggataacaacatgaacgccaactcattcacggaggcggtg
tgtaatgagatcatgaatatcgcagagacctcagtgaggtactgcagcactttgtcgcgc
cccttagactccgcccacaggttgatgcctcacctcagtaaacactctctcatcatttcc
cagcaaccccagtcccaaagcagcagccccgaacctggacgcctcagctgcggcatattc
caggctctgtacagctacgttccacagaatgacgacgagctggagctgcaggagggggac
ctggtgaacgtcatggagaaatgcgatgacggctggtttgtcggtacctcgaagaggacg
aaacagttcgggaccttcccagggaactacgtcaaagccgttaatctgtaa
DBGET
integrated database retrieval system
