Trichomycterus rosablanca: 134315742
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Entry
134315742 CDS
T09921
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
trn
Trichomycterus rosablanca
Pathway
trn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134315742
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134315742
Transporters [BR:
trn02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134315742
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GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
134315742
NCBI-ProteinID:
XP_062852520
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Position
1:77174709..77203758
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AA seq
604 aa
AA seq
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MKADTNHTTEVSGQEGEEKIQDRGQWSNKLEFVLSVAGSIIGLGNMWRFPYLCYKNGGGA
FLIPYFIFLFTCGIPVFFLETALGQFTSEGGITCWRKISPLFEGLGYGTQVIVSLLNFYY
IIVLSWAIFYFYFSFSWDLPWSSCHNEWNLETCVEFQKRNDSVNFTAPANATSPVIEFWE
RRVLRLSSGIDQMGSLNWDLALCLLIAWVLCYFCIWKGVKSTGKVVYFTATFPYLMLLVL
LIRGLTLPGAGIGIQFYLFPDLRRLADPQVWMDAGTQIFFSYAICLGSLTALGSYNKYNN
NCYRDCLALCFLNSGTSFVAGFAIFSILGFMAFEQNVPISEVAESGPGLAFIAYPRAVSL
MPFSPLWACCFFIMIIFLGLDSQFVCVESLVTAIVDMYPTVFRRKYRRELFLLVVCLLSY
LMGLVMLMEGGMYVFQLFDYYAASGMCLLFMAIFETVCIAWIYGADRFYDNIEDMIGYRP
GPLIKYCWMFFTPITCIGTFGFSLIKYTPLKYNNEYVYPWWGYAVGWLLALSSMLCIPVC
MIYKILRTEGTLKERIQTLIRPSTDLPKTRKEQVSLLAVFAPEESTPCNNKDGLLPVHQM
DTKL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccgacacaaatcataccactgaggtcagtggtcaagaaggtgaggagaagatc
caagacagaggtcaatggagcaacaagctggaatttgtgctatctgtagctgggtccatt
attggtctgggaaacatgtggcgtttcccatacttgtgctacaagaatggaggaggtgcc
tttctcattccttacttcatcttcctgtttacgtgtgggattcctgtcttcttcttggaa
acggctttgggccagttcaccagtgaaggaggcatcacctgctggaggaaaatcagccct
ctgtttgagggtcttggctatggaacacaggtcatcgtgtccttattaaacttctactac
attattgttctgtcgtgggctattttttacttctacttttcattctcctgggatctgcct
tggtcttcatgccacaacgaatggaatctggagacctgtgtggagtttcagaagaggaat
gattcagtcaactttacagcacctgccaacgctacttctcctgtcattgaattttgggag
agaagggtgctgcggctatcttcaggtatcgaccaaatgggctccctgaactgggattta
gccctgtgtttgctcatcgcctgggtcctctgctacttttgtatctggaagggggtgaaa
tctactggaaaggtagtgtatttcactgccacttttccctacctcatgctgttggtgctt
cttattcgaggtctgacactgcccggggctggcataggaatccagttttatctcttccct
gacctgcgacgtctagctgatccacaggtgtggatggatgcagggacccagattttcttt
tcctatgccatctgtttggggagtctaacagctttgggaagctacaacaaatacaacaac
aactgctatagggactgcttggcattgtgctttctaaacagtgggacaagctttgtggct
ggttttgccatcttttctattcttggtttcatggcatttgagcagaatgttcccatttca
gaagtggcagaatctggtccgggtcttgcgttcattgcgtacccccgggcagtttcactg
atgcctttctctcctctgtgggcttgctgcttcttcattatgatcatcttcctgggacta
gacagccagttcgtgtgcgttgaaagcttggttacagccattgtggacatgtatccaact
gtatttcgtcgtaagtaccgcagggagctcttccttcttgtggtgtgcctcctgtcctac
ctcatgggccttgttatgctgatggagggtgggatgtacgtcttccaactctttgattac
tatgcagcatctggcatgtgtctgctcttcatggccatatttgagactgtctgcattgct
tggatttatggtgctgatcgtttctacgataacattgaggacatgattgggtatcgtcca
ggccctctgattaagtactgctggatgttttttactccaatcacctgcataggaacgttt
ggtttctccctcattaaatacacaccccttaaatacaacaatgagtatgtgtatccttgg
tggggttatgcagtcggctggctcctggctctttcctccatgctctgcattcctgtgtgc
atgatctacaaaattctcaggacagaaggaaccctaaaagagaggatacaaactttgatc
agaccgtccacagatttacccaaaaccaggaaggagcaggttagtttactggctgtcttt
gctccagaggaatcaactccatgtaataacaaagacggcttactgccagttcatcagatg
gacactaaattatag
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