Trichomycterus rosablanca: 134316218
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Entry
134316218 CDS
T09921
Symbol
lrrc8c
Name
(RefSeq) volume-regulated anion channel subunit LRRC8C isoform X1
KO
K22038
volume-regulated anion channel
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134316218 (lrrc8c)
Ion channels [BR:
trn04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
134316218 (lrrc8c)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_14
LRR_4
LRR_1
LRR_5
LRR_R13L1-DRL21
LRR_9
LRR_6
Motif
Other DBs
NCBI-GeneID:
134316218
NCBI-ProteinID:
XP_062852611
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Position
6:complement(6366337..6375976)
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AA seq
801 aa
AA seq
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MIPVTEFRQFTEQQPAFRVLKPWWDVFTEYLSMVMLMIGVFGCTLQVMQDKIICLPQRPA
SPNQTVLLLNQTELARDPASSPVPQVPVPHEIKGLKTNLDLQQYSFVNQLCYERALHWYA
KYFPYLVLIHTLVFMVCSNFWFKFPGSSSKIEHFISILGKCFDSPWTTRALSEVSGESPE
EKEHKKNSASRSNLDTPMVEGKLEKTPSLRSIPEKIVVDKPAASVLDKKEGEQAKALFEK
VKKFRLHVEEGDLLYLMYVRQTVIKVFKFILIVVYSSILVSRVKVSVECKVESRVENMIG
YGQFRCNHTMAHLFSKLCYCYLGFVSIYGLTCLYTSYWLFYRSLKEYSFEYVRQETGIDD
IPDVKNDFAFMLHMIDQYDPLYSKRFAVFLSEVSENRLKQLNLNHEWTVDKLRQRLQSNA
SNRLELQLFMLSGLPDTVFEVTELESLKLEIINNVTIPAAISQLEDLQELSLCQCTVKIH
PGALAFLKETLKVLRVKFDDSRELPLWLYNLRNLEELHLIGSLSPDASKNITLDSLRDLK
SLKTLTLKSNFTKIPQSVVDVSSHLQHLYVHNDGTKLVMLNNLKKMVHLIELELVHCDLE
RIPHAIFSLTHLQELDLKENNLRSIEEIISFQHLRKLTCLKLWHNAITHIPEHIKKLGSL
ERLYFSHNKIEILPSHLFLCNKLRHLDLSNNDISFIPPEVGVLQSLQYFSVSSNKIENLP
DELFFCKKLKTLKLGRNKLSVLSPKISYLASLTFLELKGNHFEALPAELGYCQALKRNNL
VVEDPLFDTLPSDVRDQMKAE
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgattccggttacagaattccgtcagttcactgaacagcagccggcgttccgggtgctg
aagccttggtgggacgtcttcactgagtatctctccatggttatgctcatgattggtgtg
tttggctgcacactgcaggtaatgcaggacaaaatcatatgtctccctcaaagacctgct
tccccaaaccaaacggtgctgttactgaaccagacggagctggcgagagacccagctagt
tcccctgttccacaagtacctgtgcctcatgagattaagggactgaaaaccaacctggac
ctgcaacagtacagctttgtaaaccagttatgctatgaaagagctttgcactggtatgcc
aagtacttcccttacctggtgctcatacacacgcttgttttcatggtgtgcagcaatttc
tggttcaagttccctggctctagctccaaaatcgagcacttcatctctatattgggaaaa
tgttttgactccccctggactacaagggctctctctgaggtatcaggagaaagtccagag
gaaaaagaacacaaaaagaacagcgctagtagatcgaaccttgatacgcccatggtggag
ggcaagctggagaagacgccgtcgctgagatccattcctgagaagatcgtggtggacaaa
ccagcagcaagtgtgctcgacaagaaggaaggcgagcaagccaaagctctgttcgagaag
gttaaaaagttccgacttcatgtagaggaaggggatttgttgtacctcatgtatgttcgg
cagaccgtcatcaaagttttcaagtttattcttatcgtcgtgtacagcagcatcctggtt
tcgagggttaaagtaagcgtggagtgtaaagtggagagcagagttgagaatatgattggc
tacggtcaattccgttgcaatcacaccatggctcatcttttctccaaactctgctactgt
tacctgggctttgtgagcatctatggattaacgtgcctctatacatcctactggctgttt
taccgctccctgaaagaatactccttcgaatatgtgcgtcaggagaccgggatcgatgat
attcctgacgtgaaaaacgactttgccttcatgttgcacatgatcgatcagtatgatccg
ctgtattccaaaaggtttgctgtgtttctatccgaggtgagcgaaaacaggctgaagcag
ctcaatctgaaccacgaatggactgtagacaaacttcgccagaggttacagagcaatgcc
agcaaccgactagagcttcagctgttcatgctctcaggacttccagatactgtattcgaa
gtgaccgaactggaatccttaaaactggagatcatcaataacgtcaccatccctgcagca
atctcccagcttgaggaccttcaggagctttctttgtgccagtgcaccgttaagatccac
ccaggagccctggcttttctgaaagagacccttaaggttctgcgagtcaagtttgacgac
agccgagagcttcccttgtggctctataaccttcgaaacctggaggaactccacctgatt
ggatcacttagtcctgatgcatccaaaaacatcaccctggattcattaagagacctcaaa
tcacttaagacattgactctcaagagcaacttcaccaagattccacagtcagtcgtggac
gtgtccagtcatttgcagcacctctacgtgcacaatgatggcaccaagctggtcatgttg
aacaacctgaagaaaatggtgcatctcatcgagctcgagctggtccactgtgatctggag
cgtatcccgcatgccatcttcagcctgacacacttgcaggagctggaccttaaagaaaac
aacctgcgttccatcgaggagatcatcagctttcagcacctccggaaactcacctgtctc
aagctgtggcacaacgcgatcacccacatccccgagcatatcaagaagctgggcagtctg
gagcgtctatatttcagccacaacaagattgaaattttgccttcgcacctgttcctctgc
aacaagctgcggcatctcgacctctctaacaacgacatcagcttcattcctccggaagtg
ggcgtcctccagagcctgcagtacttctcagtgtcgtccaacaaaatcgagaacctccca
gatgaactgttcttctgcaaaaagctgaagacccttaagcttgggaggaataagctttct
gtgctctcaccaaagatttcctacctggcttctcttacatttttggagttaaagggcaat
cattttgaggctttacctgctgagctgggttattgtcaagccttgaagcgcaataacctt
gtggtggaagaccccctgtttgacactttgccttcagacgtcagggatcagatgaaagcc
gagtga
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