Trichomycterus rosablanca: 134316226
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Entry
134316226 CDS
T09921
Symbol
cfap52
Name
(RefSeq) cilia- and flagella-associated protein 52
KO
K24728
cilia- and flagella-associated protein 52
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
trn03037
]
134316226 (cfap52)
Cilium and associated proteins [BR:
trn03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
134316226 (cfap52)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_HPS5
WD40_like
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_VPS8
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_SCAP
WDR54
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
134316226
NCBI-ProteinID:
XP_062852619
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All DBs
Position
6:7476678..7484456
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AA seq
620 aa
AA seq
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MAAEVQEVPQLQLQAVIGFNGHVYSGLQVHPDREHLIYPLGCTLIIKNLKDGKQEFLHGH
TNNISCLSVSKSGRYIASGQVTFMGFKADVIIWDYAKRENYARLVLHKAKVEALAFSPNE
KYLVSLGGQDDSSIVLWNVEKKEAICGSPASAQSAGHCHTISYSNQSDQVFISAGNGTLR
VWELDLPNRKIRPTECQTGQLKRIIKCIEIPEDDGFFYCGTTSGDVLKVNLKSQLLNSFG
PVKHKFSKGVSSLKVLKTGDLLVGSGDGAINLCSGTNFKVTKSVMVEGGVSSIALRGEGH
HVFIGTEAAQIYRLRYNEFNPELLSTSHSSAVGDAAFPVGTSELFATCSQDDIRVWHTES
SKELLRIQVPNMTCNALGFMQDGRSIYSAWNDGKIRMFTPESGRLMLIIHNAHSMGVTAI
TSTSDCTRLISGGGEGQVRVWEILNTSHRLLASMKEHKASVNAIKIKSNDLECVTASSDG
TCIIWDLVRYVRNQMILANTLFRTVCYHPEEYQIITSGTDRKIGYWEVFDGSAIRELEGS
QSGAINGMHITDEGHHFVTGGDEKLVKLWHYSDGDVTHVGVGHSGSISSVCFCPNNRFII
STSTDGAILRWKIPSQLINN
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagaagtgcaggaggttcctcagctccaactgcaagcggttatcggatttaac
ggtcatgtatactcaggactgcaggttcatcctgatcgagaacatctcatctaccctctc
ggctgcacactgatcattaaaaacctaaaagatggaaagcaggaattccttcatggtcac
accaacaacatctcctgtctgtctgtatcgaaaagtggaagatatatagcatcaggacag
gtcaccttcatgggctttaaggcggatgtgataatttgggattatgccaaacgagaaaac
tacgccagacttgttcttcataaagctaaagtagaagcactggctttctctccaaatgaa
aagtacctggtgtctctgggaggccaagatgacagcagtattgtgttgtggaacgtggag
aagaaggaggcaatctgtggaagtcctgcctctgctcaaagcgccggtcactgccacacc
atcagttacagcaaccagagcgaccaggtcttcatctccgccggaaatggtacactccgc
gtttgggaactggaccttccaaacaggaaaatcagacccactgagtgtcagacgggacag
ttaaagaggattattaaatgtatagagattcctgaggatgatgggttcttttactgcggt
accacgagtggtgacgtcctgaaagtgaacctgaagagtcaactgctgaacagcttcggt
cctgtaaaacacaaattcagcaagggtgtcagttctctgaaggtgttgaagacaggagat
ctgttagtaggatcaggagatggagccatcaacctctgttctggtacaaacttcaaagtc
accaagagtgtgatggtagagggaggcgtatcttcaatagctttgcgtggtgagggtcac
catgtctttattggcactgaagcagctcagatttacagactccggtacaatgaattcaac
cctgaactcctgtccaccagccacagcagtgcagttggggatgcggcattccctgtagga
acatcagagctgtttgctacctgctctcaggatgatattcgggtatggcataccgaatcc
agtaaagaacttttacgcatccaagtccccaacatgacgtgtaacgctctgggtttcatg
caggacggcaggagcatctacagcgcatggaatgatgggaaaatccgcatgtttacacct
gagagtggtcgcctgatgctgatcatccataatgctcacagtatgggagtgacggctata
acgagcaccagtgactgcacgcggctcattagtggaggaggagaaggacaggtccgtgtg
tgggagattctgaacacctcacatagactgttagccagcatgaaggaacacaaagcttca
gtaaacgccatcaagatcaaaagtaacgatctggagtgtgtaacagccagttcagatgga
acctgcatcatctgggaccttgttcgctatgtgaggaatcagatgattttggcaaacacg
ctgttccgaaccgtttgctatcatcctgaagaataccagatcatcaccagcggaacggac
aggaagattgggtactgggaggtgtttgatggttcagctatccgagagctggaaggatca
cagtcgggagctattaatggaatgcacatcacagatgagggacaccactttgtcactggt
ggagatgaaaagttggtaaaactgtggcattattcagatggagatgttacccacgtgggt
gtgggtcacagtggcagcatcagcagtgtttgtttctgtccaaacaacagatttatcatt
agtaccagtacagacggagccattctgcgctggaaaattccctcacaactcataaacaac
taa
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