Trichomycterus rosablanca: 134316240
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Entry
134316240 CDS
T09921
Symbol
utp6
Name
(RefSeq) U3 small nucleolar RNA-associated protein 6 homolog
KO
K14557
U3 small nucleolar RNA-associated protein 6
Organism
trn
Trichomycterus rosablanca
Pathway
trn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134316240 (utp6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
trn03009
]
134316240 (utp6)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
134316240 (utp6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP6_C
U3_assoc_6
HAT_PRP39_N
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
SatRNA_48
Motif
Other DBs
NCBI-GeneID:
134316240
NCBI-ProteinID:
XP_062852641
LinkDB
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Position
6:8015320..8028672
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AA seq
594 aa
AA seq
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MADQVQQRLEERIPGFEQLQRVGLFTNKEIKSVLKRCTALEYKLHRSVLSKEDFISYIQY
EINLLELIKKRRARVGYQFKREDIEFPIIQRINSVFRRALSKWQDDVQLWLSQVAFCKKW
GTKGQLSKIFSSMLAIHPDKPSLWIMAAKCEMEDRDSSESARHLFLRALRFHPENKKVYQ
EYFRMELMHAERLRKQQQELEQAKIDLEEYEFSEEILSGKLAEIIYRDATQKIKGAEFML
SLLEIASIFDFTKDLQHNILQDLQSQHTDDSVTWDFMARRELEVAGAPELQSAQSRASDI
SCREERCSAVYEEGLKNLNTEPMWTSYVRFCLDRSKRKTNVAVLKEKRRQRLLSVLQRAH
DAELLQETFYKTWLEVLISSEETETAVQVAIAATKRFSQSLETWLLSLQTLVHLDTAETG
SLFQEALKHVNPKESLPVWKLQVVWSMASQSPDMTEALFQKALLSSVPAVSTALKETYLE
WAYKTGGYKKARKIFTSLHEHRPFSKNFFTKMVQIEKEQEKPKMSNLRDYYERALREFGS
TDDDLWMDYIREEMSALGNPENCGKLHWRAVKNLTGESVERFTTQYTLLQTGHI
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaagtgcagcagaggcttgaggagagaattcctgggttcgaacagttacag
agagtcggtctgtttactaataaagaaataaaatctgtgctgaagagatgtacagctctg
gaatataaactacacagaagtgtgctgagcaaagaggattttatttcctacatacagtat
gaaataaacttactggagctcataaagaagagaagggctcgagtgggataccagtttaag
cgggaggatattgagttccccatcatccagcgaatcaacagtgtgttcagaagagctctc
tcaaagtggcaggatgatgtccagctgtggctctcacaggttgccttctgtaagaaatgg
gggacgaagggtcaacttagcaagatcttctcctccatgcttgccatccatcctgacaaa
cccagtttatggatcatggctgcgaaatgtgagatggaagaccgggattcgtcagagagc
gctcgccatttattcctcagagctttacgctttcatccagaaaacaaaaaggtttaccag
gagtatttccggatggagctgatgcacgctgagagactgaggaaacagcagcaggaactg
gaacaggctaaaatcgatcttgaggagtatgagttctctgaggagatcctgagtggaaag
ctggctgagatcatctacagagatgccacccagaaaatcaaaggagcagagttcatgctt
tcattactggagattgcttccatttttgatttcaccaaggatctgcagcacaacattctg
caggatctgcagagtcagcacacagatgattcagttacgtgggacttcatggctcggcgt
gagctggaggtggctggagctcctgagcttcagtcagcacagagtcgagcctccgacatc
agctgcagagaggaacgctgtagtgctgtgtacgaggaaggactcaagaacctcaacaca
gaaccgatgtggacgtcgtatgtgaggttctgtttggaccgatctaagagaaagactaat
gttgcagtgctaaaagaaaagagaagacagcgactgctcagtgtgcttcagagagctcac
gatgccgaactgctgcaggagaccttctacaagacctggctggaggtcttgatctcatct
gaggaaactgaaaccgctgttcaagtggccatagcagccaccaaaagattcagccaatca
ttggagacgtggctgttgagcctgcagacactggttcatttagacactgcagagacggga
agtctgttccaggaagccctgaaacatgtcaatcctaaggagagtttgccagtgtggaag
ctgcaggtggtgtggagcatggcatctcagagcccggacatgacagaagctctgtttcag
aaagcgctgttatcgtcagtccctgcagtttccacagcgctgaaggagacttacctagag
tgggcttacaaaaccgggggctacaaaaaagccaggaagattttcaccagcctgcacgag
cacagacccttttccaagaacttcttcaccaaaatggtccagatcgagaaagaacaggag
aaaccgaagatgagtaacctgagagattactacgagcgagcgctgcgagagttcggctct
acagacgacgatctgtggatggattacatcagagaagaaatgagtgctcttggaaaccca
gagaattgtggaaagctgcactggagggccgtgaaaaacctgactggagagagtgtggag
cgcttcaccacccagtacacactcctacagaccggccacatctaa
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