Trichomycterus rosablanca: 134316244
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Entry
134316244 CDS
T09921
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b
KO
K05636
laminin, beta 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04510
Focal adhesion
trn04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134316244 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134316244 (lamb1b)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMININ_IV_B
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
134316244
NCBI-ProteinID:
XP_062852648
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All DBs
Position
1:complement(80946314..81055490)
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AA seq
1771 aa
AA seq
DB search
MKDLLQTVSALLVGLVVLAQHSPERNNMCSEGSCYPATGNLLIGRADRLSASSTCGLRGP
ETFCVVSSLENKKCFECDSRDRYDKDAHPNSHTIDNVVTTFTPDRLVTWWQSENGLENVT
IQLDLEAKFHFTHIIMTFKTFRPAAMVIERSSDFGRTWKVYRYFAYNCSSVFPHISQGPV
VAVDDVICDSRYSNIEPSTKGEVIFRALDPSFKIPDPYSERIQNVIRITNLRVRMLKLHT
LGDDLLDDRDEVKYYYAIYDLVVRGNCVCYGHASECAPTDTNDVGPDGMVHGHCMCKHHT
AGLNCERCEDFYQDIPWSPAQGRDTNACKRCECNQHSSSCHFDMAVYLASGNVSGGVCDD
CQHNTQGHHCDNCKPFYYQDRNRNLRDPYICQPCDCDERGSLNDGVCDGRTDVMKGLIAG
QCRCKPNVEGDRCDHCRQGRYGLSNHELGCLPCRCNPLGTLPGASPCETETGRCYCRRLV
TGQNCDQCLPQHWGLSASRDGCRPCDCDLGGALNNDCSPVTGQCACRENITGRRCDQVKQ
GYYFTALDHYTYEAEDATFKPTVTVEPRSLPVDRQPTWTGIGFVNVPQGETLQFNINNIP
QSMDYNMVIRYEPQLPDMVEQVTVNLERAGYPSESAHCTTPYADQQVISLPPGSRYVVLP
RPLCLEKDQKYTLKMLLALFSSNNLYHHPHIFIDSIVLMPVLRDLELFSGSADREEAWEM
FRKYRCLENSESVQKIPMTDICREYIFSVSALLHQGAMVCECDPQGSLSSVCEADGGQCS
CRPNVVGRKCDTCAPGTYGPGPAGCRTCECDPLGSQSPFCNPTTGECLCVQGAYGRHCAH
CLPGHWGFPNCQACFCNGHGEHCHPHTGQCLECRDHTAGQQCERCQSGYYGNPLLGSTER
CRPCMCPDGPGGGRQFADDCYQEPNSPQLFCVCSPGYKGSRCGECAPGYYGNPQVAGGRC
QPCQCNGNIDMHDPGACDSRTGVCLRCRHNTEGHACQHCKRGYYGDARTHSCQRCTCQLS
GTAVQSCEDGECECDRVSGQCPCLPNVEGLYCDRCAPNTWNINSGEGCELCRCQPTHSNS
QSCDVLSGQCSCKPGFGGRTCEECRELFWGDPEVKCFACDCDPRGISSPQCDKATGACTC
AEAVGGRRCDSCGRGFVGTFPDCQPCHQCFREWDQTVGELTNQTQQLVDTVEELKVSGVT
AAYQDVISNLEGGAKQITQILEDDKAQQTLTHSQELLQNAKKMVSDLNESLREVEGDVQR
VSDHHGRVVEELNTLNQDAQRQQDITDNTQRDVLRIKHSDPRGAVDSIREYYHQSVDAEN
RVNQVVSDPPGPMQQSAALRHAAESTMNTVQGETQLKHRLQDERLNTLDQKLEQDDLSEF
SQQVCGGAQGTDGCGECGGLGCVNEDGGSRCGGKECKGLITQSQNAMNEAKDLDKNIMDS
LRDVEKLNRMVSEARGRADEAKLSAQGVLLKANRSKARVGQTNQELRELIQQLRDFLTKE
ADLERIETVSDEVLKLKLPVTASELKSMTTEIRQRVAGLTGVDDILSKSAERARAAERLL
QRARATGDTSAQLKETADEVTAALNETERAQSAANASLTEAKSNLDYTEHRAVTVDSETA
GSEFKLSDATHRLISLERGTSDTQQNASESSSNAEIAQNTAESVVEDTDQTKRKLDLEVQ
PEFQLVSGLMEQKAVGVSDARQRAEQLQQEAKNLVDDAVRKMQRLRELEKEFVVNQRVLA
ERAGELEELENAANTVLQELGQKVTLYSSCL
NT seq
5316 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatttactacagacggtcagcgctctcctggtgggtttggttgtcctggcgcag
cactctcccgagcgcaacaacatgtgctcggaggggagctgttacccggccacaggtaac
ctgctgatcggcagagctgaccgtcttagtgcatcgtccacctgtggcctgcgaggtcct
gaaaccttctgtgtcgtcagcagcctggagaataagaagtgttttgagtgtgactctcgt
gatcgttacgacaaggatgcacaccccaacagccacaccattgataatgtggtcaccacc
ttcacccccgatcgcctggtaacctggtggcaatcagagaatggactggagaatgtgacc
attcaactggacctggaagctaaattccacttcacacacatcatcatgacctttaagacg
tttcgtcctgcagcaatggtgatcgagcgttcatcagattttgggcgcacctggaaggtg
tatcgatactttgcgtacaattgttcttccgtttttccacacatctctcagggaccagtt
gttgcagttgatgatgtcatctgtgactcccgctattccaacattgagccttcgacaaag
ggagaggtgatctttcgagctcttgatccttcatttaagattcctgacccatacagtgag
cggatccaaaacgttatcaggatcactaacctgcgagtgaggatgctgaagttacacact
ctgggtgatgacctgctggacgatcgggatgaggtgaagtactactatgccatctatgac
ctggttgtccgtggcaactgcgtctgttatggccacgcctccgagtgtgcaccaaccgat
accaatgatgtggggcccgatggaatggttcatggtcactgtatgtgtaaacatcacact
gctggattaaactgtgagagatgtgaggacttttatcaggatataccatggagtccagcg
cagggccgtgacaccaatgcatgcaagcggtgtgagtgtaaccagcactctagttcatgt
catttcgacatggcggtgtacctcgcgtcgggaaatgtcagtggaggagtgtgtgatgac
tgtcagcacaacacacagggtcatcactgtgacaactgtaaacctttctactaccaggac
cgcaaccggaaccttcgagatccttatatctgtcagccgtgtgactgtgatgaacgaggc
tctctgaacgacggcgtgtgtgacggcaggacagacgtgatgaaaggactgatcgccggt
cagtgccgctgtaaaccgaacgtggaaggagaccgatgtgatcactgcaggcaggggcgt
tacggtctcagcaatcatgagctgggctgcctgccatgccgctgtaatcctttgggcaca
cttcctggagcaagtccttgtgaaacagaaactggaaggtgctactgcaggcgcctcgtc
actggccaaaactgtgatcagtgtctgcctcagcactggggtctcagtgcgagcagagac
gggtgtcggccgtgtgactgtgacctaggaggagctttgaacaacgattgttcaccagtg
acaggacagtgtgcatgcagagagaacatcactggcaggcggtgtgaccaggtgaagcag
gggtattatttcaccgcccttgaccactacacctatgaggctgaggatgcaacatttaaa
ccgacggtgacggtggaaccgaggtcactgcctgtagatcgccagcccacctggactgga
attgggtttgtgaacgtaccccaaggagaaacgctccaattcaacatcaacaacatccca
cagtctatggactacaacatggtgatccgttatgagccacagttaccagatatggtggag
caggtgacagtgaatttggaacgcgctggatacccttctgaatctgcacactgtaccact
ccgtacgctgaccaacaggtcatctcactgcctcctggctccaggtatgttgtgctgccc
aggccgctgtgtttggaaaaggaccagaaatacacactgaaaatgttactcgctcttttt
tcatcaaacaacctttatcatcatccacacattttcatcgactctattgtgttgatgccg
gtgctgcgggatctggagctgttctctggttctgctgacagagaggaagcgtgggaaatg
tttcggaagtatcgctgtctcgagaacagtgagagcgtccagaaaatcccaatgactgat
atttgcagagagtacatcttcagtgtatcagctctgctgcaccaaggagctatggtatgc
gagtgtgaccctcaagggtctttgagttcagtttgtgaggctgacggtggtcagtgctca
tgtcggccaaacgtggtgggcaggaagtgtgacacgtgtgcccctggtacctatggaccc
ggacccgctggctgtaggacatgtgaatgtgacccactgggctcccagagtcctttctgc
aacccgaccaccggtgagtgcttgtgcgtacagggggcatacggccgtcactgtgcccac
tgcttacccggccactggggcttcccgaattgccaggcctgcttctgcaacggacacgga
gagcactgccaccctcacacaggccagtgtctggagtgtagagaccacaccgcaggacag
caatgtgaacggtgccagagtggttattatggcaatcctctgctaggcagcaccgagcgc
tgtcggccttgcatgtgtccagacggtccgggcggtgggagacagtttgcggatgactgc
taccaggaacctaactcgccccagctcttctgtgtgtgcagtccaggatacaaaggatcc
aggtgtggtgaatgtgcacctggttactatggtaaccctcaggtagcagggggacgttgc
cagccgtgccagtgtaatggcaacattgacatgcatgacccgggagcttgcgattcccga
acaggcgtctgtctcaggtgccgtcacaacactgagggtcatgcatgccagcactgcaaa
cgtggttactacggagatgccaggactcacagctgccagaggtgtacatgccagctttca
ggcactgccgttcaaagctgtgaagacggtgagtgtgagtgtgatcgggtgagtgggcag
tgcccgtgtctgcccaacgtggagggtttgtactgcgatcggtgtgccccaaacacctgg
aacatcaacagtggagagggctgcgaactgtgcagatgccaacccacacactccaacagc
cagtcctgtgatgtgttgtcaggtcaatgttcctgtaagcctggtttcggtgggaggacg
tgtgaggagtgtagggagctgttttggggtgatccggaagtcaagtgtttcgcgtgcgac
tgtgacccgcggggcatctcctctccacaatgtgacaaggcgacaggtgcgtgcacgtgc
gcggaggccgtgggtggtcgtcgatgtgactcctgtggacggggcttcgtgggaactttc
cccgactgccagccatgtcatcagtgcttccgtgaatgggaccagacagtgggcgagctg
accaatcagacgcagcagctggtggacactgtggaggagctcaaggtgtcaggtgttact
gcagcctatcaggatgtgatatccaatctagagggcggagccaagcaaatcactcaaata
ctggaggatgacaaggcccagcagactcttacacacagtcaagagctattgcagaatgcc
aagaagatggtgtcagatctgaatgagtctctgagagaggtggagggggacgtacagcgg
gtgtctgatcatcatggccgcgtggtggaggagctgaacacgttaaatcaggatgctcag
agacagcaggacatcacagacaacacgcagagagacgtgctgcgtatcaaacactcagat
cccagaggtgcagtggatagcattagagagtattaccatcagtcagtggatgcagagaat
cgagttaatcaggtggtcagtgacccgccgggccccatgcagcaatcggcagctttacga
cacgccgcagagtccacgatgaacacggttcaaggagagacccagctcaaacaccgtctg
caggatgagagactcaacacactcgatcagaaactggaacaggacgacctgtccgaattc
agccaacaggtgtgtggtggggcgcaggggacagacggctgtggtgaatgtggaggattg
ggatgtgtgaatgaagacggagggtctcgctgtggaggaaaggagtgtaagggtctcatc
actcaaagccaaaacgcaatgaatgaagctaaagacctggataagaacatcatggactca
ctgagggatgtggagaagctgaacaggatggtttccgaggctcgtggccgtgcggacgag
gctaaactcagcgcgcagggcgtcctgttgaaggccaatcggagcaaagcgagagttgga
cagaccaatcaggagctgcgagaactcattcagcagttacgagactttctcacaaaagaa
gcagatctggagcggatcgagacagtatctgatgaagtcctgaagctgaagctgccagtg
acggcctccgaactgaagagcatgacgacggagatccgacagcgcgtggccggtctgacc
ggtgtggacgacattttgtccaaaagtgccgagcgggcgcgcgccgccgagagacttctg
cagagggcacgtgccaccggtgacacgtctgcccaactgaaggagacggccgacgaggtg
acggcggcgctgaatgaaactgagcgtgctcagtctgcagcaaatgccagtctaacagag
gccaagagtaacctggactacacagagcatcgtgcggtcactgtggactccgagacagct
ggttcagagtttaagctgagcgacgccactcatcgcttgatcagtctggagagaggcaca
agcgacacacaacagaacgcaagcgaaagctccagcaacgctgaaatcgcacagaacaca
gcagagagcgtcgtggaggatacggaccaaaccaaacgaaaactggacctggaggtgcag
cctgagttccagctggtcagcgggctgatggagcagaaagcagtgggcgtgtctgatgca
cgtcagagggcggagcaactacagcaggaggcaaaaaacctggtagatgatgctgtcaga
aaaatgcagaggctaagagagctggagaaggagtttgtggtgaatcagagggttttagct
gagagagcaggagagctggaggagctggagaacgcagctaacactgtactacaggaactc
ggccagaaagtcactctctacagtagctgtctgtag
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