Trichomycterus rosablanca: 134316401
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Entry
134316401 CDS
T09921
Symbol
nhej1
Name
(RefSeq) non-homologous end-joining factor 1
KO
K10980
non-homologous end-joining factor 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
134316401 (nhej1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134316401 (nhej1)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
134316401 (nhej1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
XLF
XLF_CC
XRCC4
Motif
Other DBs
NCBI-GeneID:
134316401
NCBI-ProteinID:
XP_062852837
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All DBs
Position
6:25338039..25349253
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AA seq
326 aa
AA seq
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MESSGADVAVSAIPWVPVNIGGSKLLAKAWFGDTEYRVLMSDLNNIWEEDMNTERIQSRA
KDLNKRLRAPVQVFFARLHSLALPCLSGQTEFQSTAAHFTLEHQAFHLNIKLKSELEGLP
FYWEFHCTLSSVEVMSRELVRPLLSVTQVLQKQVRELCALLQRKDAELQDYKDNGAILSR
GRLQTEPFVEETFSENFTQRLTKLDKIQDNLEFDSELQKLYVAVNTTRNTQKRKCTDEDS
SASANSTSCVNKQNKADQDHNSNVLTGTRPASQSSNQNDVQQLLEETKIMSSKKIVPLIT
GAVAAAVPAERSAVRSKKKKAEGLFR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggagagttcaggtgctgatgtagctgtgtcagccataccatgggtgcctgtaaatata
gggggttctaagcttttggccaaagcctggtttggtgatacagaataccgagttctgatg
agtgacctgaacaatatctgggaggaagatatgaacacagaacgcatccagagtcgagca
aaggatctgaataagcgtttgagggctccagtgcaggtgttctttgcacgtctacactcc
ttagctttgccatgtctttctgggcagaccgaattccagagcacagcagcgcactttacc
ctcgaacatcaagccttccacctaaatattaaactcaagagtgagcttgaagggttgcct
ttttactgggaatttcactgcaccctttcctcagtagaagtgatgtccagagagctggtg
cgtccccttttgtctgttactcaagtgcttcagaagcaagttcgggaactttgtgctctg
ctacagagaaaagatgctgagctacaagactacaaagataatggagccatactcagcaga
ggtaggcttcagactgagccatttgttgaggagacattttctgagaacttcacacagagg
cttactaagttggataagattcaggacaatctggagtttgactctgagcttcagaaactg
tatgtagcagtaaacactacaagaaacacacagaaacgcaaatgcacagatgaagacagc
tctgcttcagcaaacagcaccagctgtgttaataaacaaaacaaagctgaccaagaccat
aacagcaatgtgttaacaggtacaaggcctgcatctcagtcgtccaatcaaaatgatgtc
caacagctcttagaagaaacaaagattatgagcagcaaaaagattgtgccactcataact
ggcgctgttgcagcagctgtacctgcagagcgatcagctgtgcgctccaagaagaagaag
gcagaagggctcttccgatga
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