Trichomycterus rosablanca: 134316412
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Entry
134316412 CDS
T09921
Symbol
sox21a
Name
(RefSeq) transcription factor Sox-21-A
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134316412 (sox21a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
134316412 (sox21a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
SOXp
Motif
Other DBs
NCBI-GeneID:
134316412
NCBI-ProteinID:
XP_062852847
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Position
6:26420006..26420680
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AA seq
224 aa
AA seq
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MSKPTDHVKRPMNAFMVWSRAQRRKIALDNPKMHNSEISKRLGGEWKLLSDAEKRPFIDE
AKRLRAVHLKEHPDYKYRPRRKPKNTVKKDRYQFDVTYNMGEHDDLEGTFFADTLANTKK
TTAAVAATRALLSHPAPTNHYEYLDINGKMSELTASTFSNASLDYLGRVAAFPALGILGA
TRTHPSMSNMGFMVPCNCPAWAAAASYSAPLAYVFLPGMSTALH
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaactgaccacgtaaagcgtccaatgaatgccttcatggtttggtcaaga
gcccaaagacgaaaaattgcactggataatcctaaaatgcataattctgaaatcagcaag
cggctcggtggggagtggaaacttctgtcggatgcagagaaaagaccctttatcgacgag
gccaaacgtctccgcgccgttcacttgaaggaacaccctgactacaaatacagaccgagg
cgcaagccgaagaacaccgtaaaaaaagaccgatatcagtttgatgtgacttacaacatg
ggggaacatgacgatctggaagggacgttttttgcggacacactggcgaatactaaaaaa
actaccgcagcagtagctgccacgagagcgctcctaagccaccctgcacccacgaaccac
tacgaatatctggacatcaatggtaaaatgtctgaattgactgcatcgacattttcaaac
gcctcgcttgactatctgggacgtgttgctgcatttccagcactgggaattcttggtgca
acacgcacgcacccctcaatgagcaacatgggcttcatggtgccctgcaactgcccagcg
tgggcggccgctgcttcttattccgctcctttagcttatgtgtttttgccaggaatgagc
acggctttgcactaa
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