Trichomycterus rosablanca: 134316540
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Entry
134316540 CDS
T09921
Symbol
si:zfos-323e3.4
Name
(RefSeq) volume-regulated anion channel subunit LRRC8E
KO
K22038
volume-regulated anion channel
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
trn04040
]
134316540 (si:zfos-323e3.4)
Ion channels [BR:
trn04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
134316540 (si:zfos-323e3.4)
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Gene cluster
GFIT
Motif
Pfam:
Pannexin_like
LRR_14
LRR_8
LRR_4
LRR_1
LRR_6
LRR_LRWD1
LRR_R13L1-DRL21
TEX29
LRR_9
LRR_EndoS
LRR_NXF1-5
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
134316540
NCBI-ProteinID:
XP_062853002
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All DBs
Position
6:38458933..38473128
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AA seq
809 aa
AA seq
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MIPVNEFRNIATEHNPRFRVLKPWWDVFSEYLCIVMLMIGVFGCTMQLTQEKIACLPDRL
IGAPDEEMDCSYLQKPRDNASLWEHAITKQITPNVVEIFGRKNDLDIHQYIFINSFCYER
AVHWYGKYFPYLVVIHTMIFMMASSFWFKFPGTSSKIELFVSILGKCFDSPWTTRAISEV
SEDRADVVQWKKGAMPKASAVESPDEDDKSAVFIRSTSVVSNQEKNTFESENATSVLDKK
EGEQAKALFEKVRKFQTHAEEADLVYFMYVLQTLIKVLKFSIITVYTIILVPNIQIVVTC
RVPPNLTGFGLFCCNNNKAHIFSKLAYCYMGFVGVYGLLCFYSLYWLFHRPLKAYSFEHV
RLETGINDIPDVKNDFAFLLHLTDQYDPLYSKRFAVFLSEVSESRLGQVNLNHEWPPNKL
RTRLSRNSSDRLELHLFMLPGLPDTVFDIPEVESLKLEQISNMTISGTVTQLGFLQELCL
IHCPARLQLDALAYLRDNLKVLRLTFESPDQIPLWMYTLQNLEELHLCGPLTNDISRGNT
LDTLRELKNLRVLTLRSKLAKIPSTVVDVGAQLLRLCVYNEGSKLHAFSSLKKLVNLSIL
ELISCDLERLPSAIFSLTNLQQLDLKENRLTTVEEILSLQHCRRLSILRLWHNRLCNVPE
NINKLRSLETLDMSWNKIQTLPLRLCYCTKLRHLDLSHNQITSLPPEIGILQSLWHLSVA
YNYLEALPEELFSCKRLRTLELGNNRITFLSQRVGNLAHLVCLELKGNRLESLPIEISNC
SQLKLTGLIVEHSLIDTLPSYVKDRMTER
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atgattccggttaatgagttccggaacatcgccacggaacacaacccacggttccgggtt
ctgaagccatggtgggacgttttctcggagtacctgtgcatagttatgctgatgattggt
gtctttgggtgcactatgcagctgacccaggaaaagatcgcttgcctccctgatcgcctc
atcggagccccagatgaagaaatggactgcagctaccttcagaagcccagagataatgct
agtctgtgggaacatgccatcacaaagcaaatcaccccaaacgttgtggagatatttggg
agaaaaaatgacctggacattcaccagtacatctttatcaacagtttttgttatgagcgg
gcagtgcactggtacggcaagtacttcccttacctggtggtcatacacaccatgatcttc
atgatggccagcagtttttggtttaagttccctggaacgtcatcaaagattgaactgttc
gtatccatccttggaaagtgcttcgactctccctggaccacccgagcaatcagtgaagta
tctgaggacagagcagacgtggtccagtggaaaaaaggtgccatgccaaaggcatcagca
gtagaaagccctgatgaggatgacaaatctgcagtttttattcgatccacgtctgttgta
tctaaccaggagaagaatacttttgagtctgagaatgctacttccgttctggataaaaag
gaaggtgagcaggccaaggctttgtttgagaaggtaagaaaatttcagacgcatgcggaa
gaggccgacctcgtatacttcatgtacgtgcttcagactcttatcaaggtccttaaattt
tccataatcactgtttacactattattcttgtcccaaatattcagattgtggtaacttgt
agagtccctccaaacctgactggttttggtttgttttgctgcaataacaacaaagcacac
atcttttcaaaactggcctactgttacatggggtttgttggcgtctatggacttctgtgc
ttctactccttgtactggctttttcatcgaccactgaaggcatactcctttgagcatgtg
cgcctagagacagggatcaacgacatcccagacgtcaagaacgactttgccttccttctg
caccttactgaccaatatgaccctctttactcaaaacgctttgcagttttcttgtctgaa
gtcagcgagagcaggttgggtcaggttaacctcaatcatgaatggccgcccaacaaactt
cgtactcgtctatcaaggaactccagtgatcgcttagaactgcacttgttcatgctgcca
ggattaccggatactgtgtttgacattccagaagtggaatctctgaaacttgaacaaata
agcaacatgacgatttctggaacagtaacccaacttggttttttacaggaactctgtctc
atccactgtccggccagacttcagctagatgcccttgcataccttcgggacaacctaaaa
gtcttgcgccttacctttgaaagtccagaccagatccccttgtggatgtacaccttacaa
aatctagaggagcttcacttgtgtgggccactaacaaatgatatatctcgaggcaacact
ttagataccttgcgtgagcttaagaacctacgagtcctgaccctgcgcagcaaacttgcc
aagatcccttccactgtggtagacgtgggcgctcaattgctaaggctgtgtgtctacaat
gagggcagtaagctgcatgcctttagcagcttgaagaagcttgtcaatttatccattttg
gaactaattagctgtgatctggagcgcctaccgagtgccatctttagtctcaccaacttg
caacagctagacctaaaggagaacaggctcaccactgtggaggagatattgagcctacag
cactgccggcgtctcagcatacttagactgtggcacaaccgcctttgcaatgttcctgag
aacatcaacaaattgcgctcacttgagacgcttgacatgagctggaacaaaatccagacg
ctaccactgcgcctttgttactgcaccaagctcaggcacttggacctatcccacaatcag
atcacctcactgccccctgagattggcatcctgcagagtctgtggcatctttctgtggct
tataattatctggaagcactgccagaggaattgttctcctgtaagaggctcaggactctg
gaacttggcaataacagaattacttttctgtcgcagagggttgggaacttggcccatctg
gtgtgtctggaactaaaaggtaaccggttggagtctttgccgatagagatatctaactgt
agccagctgaaactgactgggctcatcgtggagcacagtttaattgatacgctgccttct
tatgttaaagacagaatgactgaaagatga
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