Trichomycterus rosablanca: 134316604
Help
Entry
134316604 CDS
T09921
Symbol
ccdc174
Name
(RefSeq) coiled-coil domain-containing protein 174
KO
K25178
coiled-coil domain-containing protein 174
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134316604 (ccdc174)
03041 Spliceosome [BR:
trn03041
]
134316604 (ccdc174)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
134316604 (ccdc174)
Spliceosome [BR:
trn03041
]
Complex C
Other components
EJC/TREX
134316604 (ccdc174)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4078
Motif
Other DBs
NCBI-GeneID:
134316604
NCBI-ProteinID:
XP_062853080
LinkDB
All DBs
Position
6:43141224..43148996
Genome browser
AA seq
468 aa
AA seq
DB search
MDKKKKQYKVTASSLVDLKAELYRKQEAFKQERLGQDAGTAVKSHTTNKKPNIWSKPNQG
VNERAQKDVEKTAEEEQKLDKSRQKLEEKARLYEQMTKGDFPDEETESLYLVDFTQKLIE
QKKVSQRREAEIGDRDGECSDMQVPIPPPQNANEEWVDYVDALGRSRKCLKRDLPEFQKM
DEDLKNKRVLGADRTLLSEDMRREMQREKWEMEEEEEMKKPVGPIHYENIRDQEARELGV
GYFAFSQDAEQRKKQRDTLDMLRDQTTEQRVKREQLKDKRKALLEARLAKVRMRKMKKSK
LEPGAEEDEAPAADEAGNEDENKTEELIGPPPPAAAVKKVEVEIQERKDTRPGVPHVREW
DRGKEFTWGQWTSRRRDERDDEFAPPSLYFSDERRTNPGKSVKEGRSKGKHDFKWSETQS
GSNQNASQHTDMPFTTQSTSTRPQQASQPPPAQTQTLDDLLSFYKNSV
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggataagaagaaaaaacagtataaagtaacagcttcatcgctggttgatttgaaagca
gagctttatcggaagcaggaggcgtttaagcaagagcgacttggtcaagatgcaggaact
gctgtcaaatcacacaccaccaacaagaagccaaacatatggagtaaaccgaaccaaggg
gtgaatgaacgagctcaaaaggatgttgagaaaactgcagaggaggaacaaaaattggac
aaatcaagacaaaagctggaggagaaagcacgactttatgaacaaatgacaaaaggagat
tttccagatgaggagactgaaagcctttacttggttgattttactcaaaagctaatagag
cagaagaaagtgtcacagagaagagaagctgaaatcggagacagggacggagaatgctcc
gacatgcaggtcccaattccacctccacagaatgctaacgaagaatgggtggattatgtt
gatgctctgggtagatcaaggaaatgtttaaaaagggatctgccagagtttcagaagatg
gacgaggatttaaagaacaaaagagtgcttggagctgatcggactctgttgtctgaagac
atgaggcgagaaatgcagagagaaaagtgggaaatggaggaagaggaggaaatgaagaag
ccagtgggacccattcattatgaaaatattcgagatcaagaggccagagagctaggtgtc
ggatattttgctttttctcaggatgcagaacaacgcaaaaagcaaagggacactctggat
atgctgagagaccagaccacggagcaacgtgtaaagcgagagcagctgaaggacaagaga
aaagctttgctcgaggctagactggctaaagtgagaatgagaaaaatgaaaaaaagcaaa
ttggagcctggagctgaagaggatgaagctcctgctgctgatgaagctggtaatgaggat
gagaataagactgaggagctgattggaccacctcctccagcagctgctgttaaaaaggtg
gaggttgaaattcaagaaaggaaagacaccagacctggagttcctcacgtcagagagtgg
gacagaggcaaagagttcacctggggacagtggacgagtcgtcgtagggacgaacgggat
gatgagttcgccccgccgtctttatatttttcagatgagagaagaaccaatcctggtaaa
tcagtaaaggagggtcgtagcaaaggaaaacatgacttcaaatggtctgagacacagagt
ggttcaaatcaaaatgcctcgcagcacactgacatgcctttcacaacccagtccacatcc
acacgtcctcaacaagcatcacaaccaccgcctgctcagacacaaactcttgatgacctc
ttatccttctacaaaaactccgtttga
DBGET
integrated database retrieval system
