Trichomycterus rosablanca: 134316647
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Entry
134316647 CDS
T09921
Symbol
her6
Name
(RefSeq) hairy-related 6
KO
K06054
hairy and enhancer of split 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn03460
Fanconi anemia pathway
trn04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
134316647 (her6)
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
134316647 (her6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134316647 (her6)
03400 DNA repair and recombination proteins [BR:
trn03400
]
134316647 (her6)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
134316647 (her6)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
134316647 (her6)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hairy_orange
HLH
Spectrin_1st_PEPL
bHLH_NCOA
Motif
Other DBs
NCBI-GeneID:
134316647
NCBI-ProteinID:
XP_062853133
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All DBs
Position
6:46842801..46844744
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AA seq
275 aa
AA seq
DB search
MPADMMEKNSSSPVAATPASMNTAPDKPKTASEHRKSSKPIMEKRRRARINESLGQLKTL
ILDALKKDSSRHSKLEKADILEMTVKHLRNMQRAQMTAALNADPTVLGKYRAGFSECMNE
VTRFLSTCEGVNSEVRTRLLGHLANCMTQLNAMNYPAQAHVAAGPAPTSFGQPVVQIPGA
THIPVSVSVPVPGAASCKSAPPSGVSPSEAAKVYGGFQLVPATDGQFAFLIPSGAFTPGG
PVIPVYAGGAGTALPPAAASPREASLTSDSVWRPW
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgcccgctgatatgatggaaaagaactcgtcttctccggtggctgcaaccccggcgagc
atgaacacggcacccgacaaacccaagacagcatccgagcacagaaagtcgtctaaaccc
attatggagaaaagaagacgagccaggatcaacgaaagcctgggtcagctgaaaacgctt
attctggatgctcttaagaaagatagctccagacattcaaagcttgagaaagcggatatc
ctagagatgaccgtcaagcacctcaggaacatgcagcgcgcacagatgaccgctgcttta
aacgcggaccccacagtgctcggcaagtaccgcgccggcttcagtgagtgcatgaacgag
gtgacccgattcctgtccacatgtgaaggagtgaactccgaagtccggacccggttactt
ggccacttggcaaactgcatgacccagctcaacgccatgaactacccagcgcaggctcat
gttgcagccggacccgcgcccacgtcgtttggccagccggtggtgcagatccctggtgcc
acgcatatcccagtatccgtctcggtgcccgtgccgggcgcagcgtcatgtaaaagcgcg
cctccatccggcgtttcaccatccgaggctgcaaaagtgtacggaggtttccagctcgta
ccagcgacagatggacagtttgctttcttgatccccagtggtgcgttcactcccggcggt
ccggtcattccagtgtacgcgggtggagcaggaacggctctaccacctgcggctgcgtct
ccccgcgaagcgtcgcttacctcagactccgtgtggaggccctggtag
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