Trichomycterus rosablanca: 134316981
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Entry
134316981 CDS
T09921
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D isoform X1
KO
K15181
negative elongation factor C/D
Organism
trn
Trichomycterus rosablanca
Pathway
trn03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
134316981 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134316981 (nelfcd)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
134316981 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
Motif
Other DBs
NCBI-GeneID:
134316981
NCBI-ProteinID:
XP_062853648
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All DBs
Position
6:25000441..25016857
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AA seq
580 aa
AA seq
DB search
MDEEYYGGAAEWDGQDAIMEEDGFTDTEGDNKLQEECLQKFSSKDYIMEPTVFNTLKTYF
QAGGSPEHVIQLLSENYYAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQ
KADSIFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITS
VSTACQQLEVFSRVLRTSLSALLDGGEQNLEKNLPEFAKMVCHGEHTYLFAQAMISILAQ
EEQGGSAVRRIGQEVQKFALQSGHDASQITLVLGTAAAYPRACQALGAMLSKGALNPADI
TVLFKMFSSMDPPPVELIRVPTFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVVETW
KKNKRVNINKDELKSTSKAIETVHNLCCNENKGATELVAELSTLYQCIRFPVVAMGVLKW
VDWTVSEPRYFQLQTDHTPIHLALLDEISTCHQLLHPLVLQLLVKLFETEHFKLDVMEQL
ELKKTLLDRMVHLLSRGYVLHVVSYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFV
QLFLPILENDSIAGTIRTEGEHDSVAEFIAHCKSNFIVIN
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaatactatggcggtgctgcagagtgggacgggcaggatgcgattatggag
gaagatggcttcacggatacagagggggataacaaattacaagaggaatgcttgcagaaa
ttctccagtaaggactacattatggagccgacagtgtttaacacgctgaaaacctacttc
caggcaggtggctctcctgaacatgttattcaactcctgtcagagaattactacgctgtg
gcacaaacggtgaacctgctggctgagtggctcattcagatgggtgtggagccagctcag
gtgcaagaacgagtggagaatcatctaaaaagcctgcttattaaacactttgacccgcaa
aaagccgattccatttttactgtagaaggagagacacctgcatggttggagcagatgatt
gcacatacaacatggagagatctcttctacaaactagctgaagctcatcctgactgcctg
atgcttaacttcacagtaaagctaatctcagatgctggataccaaggagagattactagt
gtctctactgcttgtcaacagctagaagttttctcccgtgtgttacgcacctcactttct
gctctgctagatggtggagagcagaatttggaaaagaaccttcctgagtttgctaagatg
gtatgtcatggcgagcacacatacctttttgctcaggccatgatatccattctggcacaa
gaggaacagggtggatcagcagtgcgtcgcattggtcaggaagtacagaaatttgccctt
caaagtggccatgatgcaagtcaaataacattggtactgggcacagcggcagcctaccca
cgtgcatgccaggctcttggtgcaatgctgtcaaaaggggcactaaatcctgcagatatc
acagtgcttttcaagatgttcagcagcatggaccctcctcctgtggaactgatccgtgtt
ccaacctttttggatctgtttatgcagtctttgtttaaacctggagccaaaataaaccag
gaccataaacacaaatatattcacatactggcctatgcggcaagtgtggtggagacctgg
aagaagaacaagcgtgtcaatatcaataaggatgaactgaagtccacctccaaagccata
gagactgttcacaatttgtgttgtaatgaaaacaaaggagctacagagctagtggcagaa
ctcagcactttgtatcagtgtattaggtttccagtagtagcaatgggagtgctgaagtgg
gttgactggacagtgtcagaacctcgctactttcagctgcagacagatcacacacctatt
catttggccctactggatgagatcagtacatgtcatcagcttctccatccactggtgctg
cagttgcttgttaagctatttgagacagaacatttcaaactcgatgtcatggagcagctg
gagttaaagaagactttacttgaccgcatggttcacctgttgagtcgaggctacgtgctg
cacgttgtcagttacatccgtaaatgtctggaaaaacttaacactgacatctcactcatc
agatattttgtaacagaggttcttgatgtgatcgctcccccatatacctctgactttgtt
cagctgtttttacccattcttgagaatgacagcatagctggaactatccgcactgagggg
gaacatgattctgtggctgaatttattgcacactgcaaatccaacttcattgtgatcaac
tga
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