Trichomycterus rosablanca: 134317089
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Entry
134317089 CDS
T09921
Name
(RefSeq) methyl-CpG-binding domain protein 5-like
KO
K23219
methyl-CpG-binding domain protein 5
Organism
trn
Trichomycterus rosablanca
Pathway
trn03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134317089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134317089
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
134317089
Heterochromatin formation proteins
MBPs (metylated DNA binding proteins)
134317089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBD
DUF7028
Motif
Other DBs
NCBI-GeneID:
134317089
NCBI-ProteinID:
XP_062853851
LinkDB
All DBs
Position
6:complement(35462975..35492531)
Genome browser
AA seq
1426 aa
AA seq
DB search
MNGAKESERGDGEGQPAPAQVPIGWQRKVDSTRVLYISPSGSVLSSLEQVKTYLLTNGTC
KCGLECPLILPKVFNFDPGATVKQRTAEDVKADEDVTKLCIHKRKLIAVATLHKSMEIPH
PSLTLTGPIGVTSVTSMAPTTPRSANPRAIRNKSHDGLPNSTLPDCKSPFKMIMAAGQRH
YSADMGNAQQPEHYSGYSRQRLGSNEPGPKSPYRSRPVGMLSPSSGLQTYGDSALSPRTD
SLGSPDGFARSNPCGFQNSPSPIHGNSRTPLSPPGVMIHGSPITQLSYAMTGRTNTPLPP
PVPNKSPIMKKPHCNVSYPPNMDMTRAVFHHKAQPTPHPVLSPNIPLTCTLQKKQMTSEK
DPLGILDPIPSKPVIQNSMPIPSPSNFQPNTHSQVPMMNVNIPPAIVPLPSNLPLPTVKP
GPIGHSGHMQRTQHGAATSISPSPVTSPVHMSGPAMSRIEASPQRSRSSSTSSEHGSFAM
PSGPQASCSTMKVPPRSPRSSMGSPRPTMPSSPSAKPDTLHQYKDPNQVMSGINNVISSQ
HNSMFPPASVSNAPQKNHPGLLGMPLNHILNQHNAASFPASSLLSAAAKAQLANQNKLGG
NIGEVGGSGAAVVGSGMGGGAHSMGSGGATIAGGGNNGGNGIPCLLGGGSCGSRTVEGPN
NLNHMLPPSSTMLMPMPEGQSGRAALRDKLMAQQRDPLRKRKQPSNTGSQHDNMVFNMMK
PEISGPRPPCTPPEQIRKVPRLVGLPPNTSMAQLLQSMSSQSSHMARGSRPLPGGPGQMH
FGESAVPPGIAQQSMHSQQRLHSQSEPMHCHSMETQFPGMMNQMQTTAIGNCGSLGQSGQ
LPLGHPAMGHPSTHPQQLSHVHQQQQGIPHVHIRPNMSCMVPNNNDASCAQAMTDTGNVS
LLNCSISNPQSGSIMSGTVHMYQQHQLHPALQGMQRVSPYQAQGHPYSETQFPDNNAPNS
NNMSCLYQGCIPNSNPASHTQISSQSGVASLPAEPGMYREGQQELQGKNKVALSTGGGGH
GSEHLPSAGTEAVDAMYRSPTSKGMQLGITTSTAGSSGTQASPVPALRAMTAFTASIGEP
HGMPHSVNAVVHGPRGHETSDVMAQSCTRPTPPTVAPPRTNRARRSSEQGKSTPDNTDTH
DYFRSPRQQWEEQNQAHWRGEEFLECSAQVQSSPCSEGGERVQSGTETNPQCHEPSEPAN
DGNPGNFRYNQLPLHVNFKERLEQTVERCAHINGGPPLCPRGSYNEPLTGDDQSPSSSTS
LEGPLLKDYAHFNGHFNGHCAPSPSDTKSLSSEEELRHPDSPSAELLHYRPRGYNVGELV
WPIKGFSSWHNKLMGEEHGHNPSMLLSDQSKVEPEKLKTLTQDLEALERAAKRNRKAGKL
NNHLEAAIQEAMSELDKISGTVHPMSSRERDRQVKLPKPKRRKISR
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagctaaggagagtgagagaggggatggcgaggggcagcctgcacctgcccaa
gtgcccattggctggcagcgcaaggtggattctaccagggttctctatatcagtcccagt
ggctcagttctgtccagtctggaacaggtaaagacctacctacttacaaatggcacctgt
aagtgtggcctggagtgtccactcatcctccccaaggtgtttaattttgatcctggggcc
actgtcaagcaaaggactgcagaggatgtgaaggctgatgaggacgttacgaagctttgc
atacacaagagaaagcttattgctgtagccactctgcacaaaagtatggagataccacac
ccctccctaacgctgaccggacccattggagtcacaagtgtgacctccatggctcctacc
accccacgttctgcaaatccccgagcaataaggaataagtctcatgatgggctgcctaac
tcaacactacctgactgtaagagcccttttaagatgataatggcagcaggtcagcgacac
tactctgcagacatgggcaatgctcagcagccagagcactattctggatactctcgacaa
cgactgggcagtaatgagccaggtcctaagtcaccatatcgaagtaggcctgtgggaatg
cttagcccttcatcaggcttgcaaacttacggggatagcgctttgtcaccaagaacagac
tctttaggtagtccagatggatttgcacgaagcaatccatgtggttttcagaatagtccc
agcccaattcatggtaacagcaggacgcccctgtcccctcctggtgtcatgatccatggt
tctccaatcacccagttatcctatgccatgactggaaggactaacacacctcttcccccc
ccagtccccaacaaaagtcctatcatgaaaaagccacactgtaatgtcagctatcctcct
aatatggacatgaccagagcagtatttcaccataaggcccagcctacacctcaccctgtt
ctctctcctaatattcctctcacgtgtaccctccagaaaaaacagatgacctcagagaag
gaccctctgggaattctggatcccattcccagtaaacctgtaattcagaattctatgccg
atcccaagcccatcaaactttcagcccaacacccactctcaggtacctatgatgaatgta
aacatcccccctgcaattgtcccattgccaagcaaccttcccttaccaacagtgaaacct
gggccgattggccacagtggacacatgcagaggactcagcatggagcggccacctccatc
tccccctcaccagtcacgtcccctgtacatatgtcaggacctgcgatgagtcgaatagaa
gcatctccacaaagatcccgctcctcctccacctcctcagagcatggaagctttgccatg
ccttctggtccacaagcttcatgtagcaccatgaaggttccaccacggtcacccagatcg
tccatgggttcacccaggcccacaatgccatccagcccttctgccaagcctgacacactc
caccagtacaaagaccccaaccaggtcatgtctggaataaataatgtgattagcagtcag
cacaactctatgtttcccccagcctcagtcagtaacgctccccagaagaaccaccccgga
ctcctgggcatgcctcttaatcacatccttaatcaacacaatgctgcctctttccctgcc
agcagtctactctcagcagcagccaaagcacagctagcaaatcaaaacaaactgggcggt
aacattggtgaagttggtggcagtggcgctgccgtagttggttcaggcatgggtgggggt
gctcattctatgggaagtggaggtgctaccattgctggtgggggtaataatggaggtaat
gggattccatgcttacttggtggtggaagttgtggtagcaggacagttgaaggacctaac
aatttaaatcacatgctgccacccagttccaccatgctcatgccaatgcctgagggccag
agtggacgtgcagctctgcgggacaaactcatggcccagcagcgcgatcctcttcgtaaa
cgcaaacagccgtccaacactggcagccaacatgacaacatggtcttcaacatgatgaaa
cctgaaattagtggccccagaccaccatgcactcctcccgagcaaataaggaaagtgcct
cgacttgtaggcttacctcccaacacctccatggcccagctgcttcagtcaatgagcagc
caaagctcccacatggcaaggggcagtcggccattacctggaggccccggtcagatgcac
tttggagagagtgctgttcctcctggcattgctcaacaaagcatgcattcacagcagcga
cttcacagccaatcagaaccaatgcattgtcacagcatggagactcagttcccagggatg
atgaaccaaatgcagaccacggctataggaaactgtgggtctttgggacaaagtggacag
cttcctctaggtcaccctgctatgggacacccaagcacccacccacagcaactgtctcat
gtacatcaacagcaacaaggcattcctcatgtgcatatccggccaaatatgtcatgtatg
gtacctaataataacgatgcaagctgtgcccaagccatgactgacacaggtaatgtgtct
ttactgaactgcagcataagtaatcctcagtctggcagcattatgagtggcacagtacac
atgtaccagcagcatcagctgcatccagcactccagggcatgcagagggtctcgccatac
caggctcaggggcacccctattcagaaacacagtttcctgataataatgccccaaactcc
aataacatgtcctgtttgtaccagggatgtatacccaacagcaacccagcctctcatacg
cagataagttcacagtctggtgtggcatcacttcctgcagagcctggaatgtatcgggaa
ggtcagcaagagctccagggtaaaaataaggtagcattgtcaacaggtggtggaggtcac
gggtcagaacacttgcctagtgccggcacagaagcagttgatgccatgtaccggtcacca
accagtaaaggcatgcagttgggcataaccacatcaacagcaggcagcagtggtacacaa
gccagccctgtgcctgccctcagagccatgacagcttttaccgcctccatcggcgagcct
catggaatgccacactctgttaatgctgtcgttcacgggccgcgaggacacgagacgtcg
gacgtgatggcacaatcctgcaccaggccaacaccacctacagtggcaccacctcgaaca
aatcgtgcccgcagaagttcagagcagggcaagagcacacctgacaacacggacacgcac
gactacttccgctcgcccaggcaacagtgggaggagcaaaatcaagcccactggagaggg
gaggagtttctagaatgttcagcacaggtgcagagcagtccatgcagtgaaggtggcgag
agagtgcaaagtggcacagaaacaaacccgcagtgtcatgaaccatctgagccagccaat
gatggaaatccaggaaattttcggtacaaccagcttccacttcacgtcaacttcaaagag
cggcttgagcagacggtcgagcggtgtgctcacatcaacggcggtcctcctctgtgccca
cgtggcagctataacgagccactgacgggggatgatcagtcacctagctcctccaccagt
ttagaggggccactgctaaaggactacgcccatttcaatgggcactttaatgggcactgt
gcaccaagcccctcagacaccaagagcctgagcagcgaggaggaattgcgccaccctgac
tcgccctccgccgagcttctgcactaccgacccaggggctataacgtaggtgaacttgtc
tggcctatcaagggcttctcttcctggcacaacaaactgatgggggaggagcatggccac
aatcccagtatgcttttgtctgaccagtccaaggtggagcctgagaagctgaaaacacta
acccaggatcttgaggcactggaaagagctgccaagaggaatagaaaagctgggaagttg
aataatcatttagaagctgctatccaggaagccatgagtgagctggacaagatttcaggc
actgttcatccaatgtcctctcgagagcgtgaccggcaggtgaaactgcccaaacccaaa
aggaggaagatctccagataa
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