Trichomycterus rosablanca: 134317137
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Entry
134317137 CDS
T09921
Symbol
usp4
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 4
KO
K11835
ubiquitin carboxyl-terminal hydrolase 4/11 [EC:
3.4.19.12
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
trn01002
]
134317137 (usp4)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134317137 (usp4)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134317137 (usp4)
Peptidases and inhibitors [BR:
trn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
134317137 (usp4)
Ubiquitin system [BR:
trn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134317137 (usp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Ubiquitin_3
DUSP
UCH_1
USP7_C2
USP7_ICP0_bdg
DUF1609
Choline_bind_1
Motif
Other DBs
NCBI-GeneID:
134317137
NCBI-ProteinID:
XP_062853923
LinkDB
All DBs
Position
6:41427081..41445802
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AA seq
1009 aa
AA seq
DB search
MAEGGGPEPGNSSDQEPVHHQPAVPSIENQKQSIGTLLKTTLRKGDEWYLIDSRWFKQWK
KYVGFDSWDLYNVGEHNLYPGPVDNSGLFSDQEMQVLKEHLIDELDYVLVPTDAWNKLVS
WYGCLEGQRPIVRKVVEHGMFVKHCKVEVYLLELNLCENDNMDKVVTRHFSKADTIDTIE
KEMRSLFDIASEKETRLWNKYMSNTYEQLNKPDSTVQDAGLFQGQVLVIERKNEDGTWPR
QASHPKSSTATSRTYTTSPKLSSNSPATISSTVTNGDSSSNSSYMLNNSSSSGNRLGGYS
SYSSSYSYRESAAQPGLCGLSNLGNTCFMNSALQCLSNSPPLTEYFLEDQYEAEINRENP
LGMRGEIAEAYADLIKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQELLAFLLDG
LHEDLNRVKKKPYLALRDAEGRPDEIVAKEAWTNHRLRNDSIIVDIFHGLFKSTLVCPEC
SKVSVTFDPFCYLTLPLPMKKDRTMEVFLVRNDPQSKPMQFRVVVPKLGTVADLCSALAK
LSGVPAENMVVADVYNHRFHKIYKKEEGLNHILEKDDIFIYEVLEEDSDRMNLPVYFRER
QMKHSGGSSSAMLFGQPLLITVPRQNLTPDTLYERVLERIGRYVKHLQGTVTESKAAATA
TSSNSHSLDCGASASSHKAGLSSTSSSMSNGASCSAGSINDSNHSETCNGPNGVCEREEE
AMDHQGSPDPESSQSETVDKEDEASDSENKPITKSGKSCSSRPKLFSFSVVNSYGTANIS
SLPCDGNSLKLTPHSTLAIDWDSDTKKLCYDEQEAEAYEKHESMMQAQKKKATVALRECI
ELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRVLVVHLKRFSYNRCWRDKLDTVV
DFPIRDLNMSEFVCDPKAGPYIYDLVAVSNHYGGMGGGHYTAYAKNKSDGKWYYFDDSSV
SSASEDQIVTKAAYVLFYQRRDGECPSGSAPSAALGGASESQDDRMDTN
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggcggagggaggcggacccgagccgggcaacagttcagaccaggagccggtacaccac
cagcctgcggtcccttctatcgagaaccaaaagcagagcatcggaacgctactgaaaacc
acactgcggaaaggagacgaatggtatttaatcgacagccggtggtttaagcagtggaaa
aaatatgtggggtttgacagctgggatttgtacaatgttggggagcacaatctataccct
ggccctgttgacaactctggacttttttcagaccaagaaatgcaagtgctgaaagaacat
cttattgatgagttagactatgtcctggtgcccacagatgcatggaataagcttgtcagc
tggtatggttgtctggaggggcaacgacccattgtcagaaaggtggtcgagcatggcatg
tttgtcaagcactgtaaagtggaagtctatctattggaactgaatttgtgtgaaaatgac
aacatggataaagtggtaactcgccatttcagcaaagctgatactattgacaccatcgag
aaggagatgaggtctctctttgatatcgcatcagaaaaagagacgcgattgtggaataag
tacatgagtaacacctacgagcaattaaacaagcctgacagcactgttcaggatgctggg
cttttccagggccaggtgcttgtgattgagagaaagaatgaagatggcacatggcccaga
caagcctcccatcccaagtccagtacagccacatccaggacctacaccacttcaccgaag
ctctcctccaattcacctgccactatttcttctacagtgaccaacggagacagcagtagc
aactcaagctacatgctaaacaacagcagctcatctggtaacaggttgggaggctacagc
tcttacagctcatcatacagttacagagagtctgcggcacagcctggcctttgtggccta
agcaatctgggcaacacctgctttatgaactctgcactccagtgtctgagtaattcgcca
ccgctaacagagtatttcctggaggaccaatatgaagcggagatcaaccgtgagaatcca
ttagggatgcgaggggagatcgccgaggcctatgcagatctgatcaaacagatgtggctc
agtcggagcagctacgtggctcccaggactttcaaaacacaggttggccgctttgcccct
cagttctctgggtaccagcagcaggactctcaggaattgctggcctttttgctggatggc
ctgcatgaagacctaaatcgggtcaagaagaagccgtacttggccctgagagatgcagag
ggacggccagatgagattgtagctaaggaggcttggacgaaccatcggttacgtaatgat
tccatcatcgttgacatctttcacggcctgttcaagtccacactggtctgccccgagtgt
tccaaagtgtctgtcacttttgaccccttctgctacctcactctgcctctgcccatgaaa
aaggaccgcaccatggaggtgtttctggtccgcaatgaccctcagtctaaacccatgcaa
tttcgtgtggtagtccccaaactaggtacagtggcagatctgtgcagcgcattggcaaaa
ctgtccggagttcctgcagaaaatatggttgttgcagatgtttacaatcaccgtttccat
aaaatttacaaaaaagaggaaggtcttaaccacatcttggaaaaagatgatatctttata
tacgaggtgttggaggaggacagtgatcggatgaatctgccggtgtactttagagagaga
caaatgaagcacagtggaggctcctcaagcgccatgctgtttggacaaccactgctcatc
acagttcctcgccaaaaccttactcccgacactctgtatgaacgcgtgctggaaagaatt
gggcgctatgtaaagcacttgcagggcactgtaacggaaagcaaagcagctgctacagct
acatcctccaatagccattcactggattgtggagcttcagcatccagccacaaagcagga
ctaagtagcactagcagctcgatgtccaatggagcatcctgtagtgctggttccattaat
gacagcaaccactcggaaacctgcaacggccccaatggagtgtgtgaacgcgaagaagag
gccatggatcaccagggcagcccagatccagaaagcagccagtcagagaccgtggataag
gaagatgaggcctcagattctgaaaacaaacccatcactaaaagtggaaaatcttgttcc
tcccggcctaaactcttttcttttagtgtggtgaactcctatggcacggctaacatcagt
tccttaccatgcgatggcaacagcctcaaactcacaccacattccactttagccattgac
tgggactcggataccaagaaactgtgctacgatgagcaggaggcagaggcctacgaaaag
catgagagcatgatgcaggctcagaagaaaaaggccacagtagctttgagggagtgcatt
gagctcttcactaccatggagactctgggcgagcatgatccttggtactgtcccacttgt
aaaaagcaccagcaggccactaaaaaatttgatctgtggtctctaccccgggtactggtt
gtgcatttgaaacgtttttcctacaaccgctgctggagagacaaactggacaccgtggtt
gacttccctatcagggatttgaacatgtctgagtttgtctgcgaccctaaagctggcccc
tatatttatgaccttgttgctgtgtccaaccactatggaggaatgggtggaggccactac
acagcatatgctaagaacaagagtgatgggaaatggtactactttgatgacagcagtgtg
tcctctgcctctgaggatcagatagtaactaaggcagcctacgtgctgttctaccaacga
cgagacggagagtgcccatcaggatcggctccctccgcagcactcggaggagcctctgag
tcccaggatgaccgcatggacaccaactga
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