Trichomycterus rosablanca: 134317151
Help
Entry
134317151 CDS
T09921
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 2-like
KO
K05046
solute carrier family 6 (neurotransmitter transporter, GABA) member 13
Organism
trn
Trichomycterus rosablanca
Pathway
trn04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
134317151
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
trn02000
]
134317151
Transporters [BR:
trn02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
134317151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
134317151
NCBI-ProteinID:
XP_062853954
LinkDB
All DBs
Position
6:complement(42433887..42453001)
Genome browser
AA seq
604 aa
AA seq
DB search
MMMNADTGVQPTLPQPDSEKLTKDVNVQNERGQWSSKMEFILAVAGQIIGLGNMWRFPYL
CYKNGGGVFFIPYLVFLFACGIPLFFLEVSLGQYTNQGAITSWRKICPLFQGLGLGSQVV
VFYCSIYYAVILAWAFFYLFFSFSSELPWASCSNPWNTETCVEFVSMGKNFSTLHNATSP
VLEFWERRVVNITGSMNKLGNVRWELALCLLLVWIICFFCIYNGVKSSGKVVYFTATFPY
LMLVVLLVRGLTLPGAMDGIKFYLYPDPSRLSDPQVWMDAGTQIFFSYAVCMGCLISLGS
YNKYNNNCYKDCVYLCLLNSGTSFVAGFAIFSVLGFMAYEQEIDISAVAESGPGLAFIAY
PRGVAMMPVPQLWAVSFFIMVILLGLDTEFVGLESLITSIADLFPSFFSIGHRRTLLLLF
ISIVCFLIGLVLVTEGGLYIFQLFDYYSFSGVTVLIFGLLESVCIGWVYGADRLYDNIKD
MIGYRPVCLMKYCWKYITPLVCMGTFVFSLVKFTPLKFNNTLEYPWWGYIFGWWLTLSST
LLAPLWMIYALLTSSGSLKQRLRVLCTPASDLPLDRKTGKHHVPGNYIGLKPVKTEQDIS
ETHI
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgaatgctgatacaggagtgcagccaacgcttccacagccagactcagaaaaa
ctcactaaagatgttaatgttcaaaatgagagaggccaatggtcgagtaaaatggaattt
atcttggctgttgccgggcaaattattggtctgggaaatatgtggaggtttccatacctg
tgttataagaatggaggtggagtgttcttcattccatatctagtcttcttatttgcatgt
ggtattccactgttttttttggaggtatccttgggtcagtacaccaaccagggtgccatc
accagttggaggaagatttgtcctctgtttcaagggttgggcttaggatctcaggtggtt
gtgttctattgcagcatctactatgctgttattcttgcctgggcattcttctatctcttc
ttttcatttagttctgagctgccctgggctagttgtagtaatccctggaacacagaaact
tgtgttgagtttgtcagtatgggtaagaacttcagtaccctgcacaatgcaacatcaccg
gtcttagagttttgggagagaagagtagtaaatattacaggtagtatgaataagctggga
aatgtaaggtgggagctggcactctgtctccttctggtctggatcatctgctttttctgt
atctataatggagtgaagtcttcaggcaaggtggtttatttcactgctacatttccttat
ctaatgctggtggtactgctggtgcgtggactcacgcttcctggggcaatggatggcata
aaattttacctctatccagatccttcacgtctttctgaccctcaggtttggatggatgct
ggaacacagatatttttttcttatgctgtctgtatgggttgccttatttctttaggaagc
tacaacaagtacaacaacaactgttacaaggactgtgtttacctgtgcttgttgaacagt
gggacaagcttcgtggctggatttgccatcttctctgttttgggtttcatggcctatgaa
caggaaatagatatttcagcagtggcagaatcaggtccaggattggccttcattgcctac
cccagaggagtcgcaatgatgcctgttccacaactatgggctgttagtttcttcatcatg
gtcattttgctgggcttggacactgagtttgtgggtttggaatcactgataacaagcata
gcagacctctttccttccttcttcagtattggtcatcggcgcacactgcttctgctcttc
atctccattgtctgctttctcattggtctggttttagtaacagagggcggcttgtatatt
ttccagttgtttgattactattctttcagtggggttacagttcttatatttggccttcta
gaatcagtgtgtattgggtgggtgtatggtgcagaccgcttatatgataatattaaggac
atgattggttatcgtccagtatgcttaatgaaatattgctggaagtacatcactccacta
gtctgcatgggcacgttcgtcttctctctggtgaagttcactccactgaagtttaacaat
acacttgaatacccctggtggggctacattttcggctggtggttaactctctcttcaacc
ctattggctcctctttggatgatctacgctctcctcacctctagtggttcgctgaaacag
agactacgtgttctttgcacccctgcaagtgaccttcctttggaccgtaaaacagggaaa
catcatgtacctggaaactacattggcctcaagcctgtaaagacagaacaagacatcagt
gagacacatatctag
DBGET
integrated database retrieval system
