Trichomycterus rosablanca: 134317180
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Entry
134317180 CDS
T09921
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5-like isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134317180
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
134317180
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
134317180
NCBI-ProteinID:
XP_062853993
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Position
6:complement(43079693..43101532)
Genome browser
AA seq
1349 aa
AA seq
DB search
MSEELQEHYRNARSKTQARCHPKGQSEHPGPEKCCHHQRCNSSISPKSGSTEFHSTYLKR
PTSHTLRPHNLNEKTYKKDLLIQGEESRRREKFKQSTEPQAQKGAIYKVFKQSDKEEHYN
ILGYGEELAHGSEIDWQVGLGHKDKTDYEGDGSLDPLSGFYNENNKEMSGVAGRLQTKRK
EGQKTEVGGKMGSIIKPVDCHFAMKSTTYSRYEQIRHKDEINLKKTRVPVKSSHNMFSGE
MFSNEFYPNHIYTNGISTDDLSPGRTDVATLFPDICDAGEALADVEGFSDCDLFENIEPS
WISDTEEVEDHEGAMTLSVKNCLKSSSESLSTFEEDDGEKAEEQSQTNHMDTNSQIFENS
QDSVHLDKSEKEAESLSEISHNTSYSNSSLCSSESETTFDKLDKTETRTNQDRPETQQAV
SPHSRSADLPTFEPDLQCASSATALKSEEVTSLQMQEDHCNGQKEDRLEVQGSPSILSTE
KPEPLTEEHVYEEPQFQIKDFLQSNKYLMTRSISMEAPTNRLDPFCTSVSRKHRLMLHPQ
SHYKHNHFLGDSLPALSGSLGCLSSGIPGPPVMDIPPPFELSSITKRPIRKSTPALPNEV
TACSRKPDFGFKRYFLPLRFLRKTEKRSDSRTSRSSSESSPQGSCKKLHLIRQCAGSPEL
HRAHDYSLPSSPSSVHLPKTLLRQSVHNNVLSATPNSWGMLGLEPDDLVHSILVQPLTLS
KPRSFSSPNVDSSVYENVLNTSPHYENIQVRLLTPSSPNLRNLSSANDIDGYVDMSSLPG
FQSKSLSAEQETESAYTTCSPLIRSDGTVSVSLGVVNTKEREKNATKGLTVNCSRTFYTV
KELLDSETQHVKTLKLLNETIDADKQLKKLWNNIPAIYTLHLDLQAQLESCIKEWHQKEG
IADIFLSKKAEFSVFSSYISDYDQKIKTMEQMEDTQLDITTLKQQLLQVIVRVLQYHMLL
TDYMKNLSQNSKELEDTKAAQLMVSGVTDYTKNSLKNEADLLRLVHIEHSVQGLKNLLQP
GRVFVKEGTLMKVSRKYKQPRHLFLMSDILLYTYPQQDGKYRLINTLALTEMEVTKLLIE
NTQNGLKIEVKDITITLLASSCIERDDWFVTLNRTIADLGSVLAVPAGGYEVDKSVACLG
ENAPPLVSVSQVAVCMNCPVQFSLTHRRHHCHACGKVVCRDCCRNKVPLKYMKNRKAKVC
DKCYSELCKNEGDVSMLIESSSRPLSTVFQNIHPTSLWKSRRGHASFSQVTGSEGDMSGT
LQRSRNSKRSWKSLWFLLKDKVLYTYPQPEERLACESLPLMGFTVRSESEGESSVFQLYH
DSTLFYTFRAQDTHTAQRWVSAMEEATVL
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagaattacaggagcattacaggaatgccagatccaagactcaagctcgatgt
catcctaaagggcagtctgaacatccagggcctgaaaagtgttgccatcaccagagatgt
aattcatccatttcccccaagtccggatctacagagtttcacagtacttacttgaagaga
ccgactagccacaccttaagacctcataatttaaatgagaaaacctataagaaggactta
ctcatacaaggggaggaatcaaggcggagagagaagtttaagcaaagcactgagccacaa
gcacagaaaggtgctatatataaagtgtttaagcaatcagataaggaagaacactacaac
atattgggttatggtgaggagctggcacatgggagtgagatagattggcaggtgggttta
ggacacaaggacaaaactgactatgaaggggatggctcgttggatcctctttctggcttc
tacaatgagaacaataaggaaatgtctggagtagcaggacgtctacaaacaaaaaggaag
gaaggccagaaaacagaagtgggtggaaaaatgggatcgattatcaaaccagttgattgt
cactttgctatgaagtcaactacatacagtcgttatgaacaaataaggcataaagatgaa
ataaacctaaagaaaaccagggtacctgtaaagtcttctcacaacatgttctctggtgaa
atgttttcaaatgaattttatcccaatcatatttacacaaacggaatcagtacagatgat
ttgagcccaggcagaactgatgtggccaccttgttcccggacatctgtgatgcgggcgag
gcattagcagatgttgaaggattctcagactgcgatctctttgagaacattgaaccatca
tggatctcagacactgaagaggttgaagaccatgaaggagcaatgacactgtctgttaaa
aactgcttaaagagctcaagtgagtcgttgtctacctttgaggaagatgatggtgaaaag
gcagaggaacaaagtcaaactaatcatatggataccaattctcaaatatttgaaaattct
caggattctgtgcatttagataagtctgaaaaagaagcagaaagtctctctgagatttct
cacaacacgtcgtactccaactcctcattgtgctcctctgagtctgagacaacctttgac
aaactggacaaaactgagaccaggactaatcaggataggccagaaactcaacaagctgtg
tcaccccactccagatcagctgacttaccaacatttgagcctgatttacaatgtgcctct
tcagcgactgctttaaaatctgaagaagtaacatccctgcagatgcaagaggaccactgt
aatggacaaaaggaagacagattagaagttcaaggcagcccatcaatattgtcaacagag
aagccagagcctctcacagaagagcatgtgtatgaagagccacaatttcaaatcaaagac
ttcttgcagtctaataaatatttaatgactcgttccatatctatggaagcacccactaac
aggctggacccattttgcacctcagtatccagaaagcatcgtttaatgctacacccacag
tcccattataaacacaatcatttccttggagatagcttgcctgctctgagcggctcatta
ggatgtctctcttcaggtattcctggcccccctgtcatggacataccacctccttttgag
ctgtcttctatcacaaagcgaccaattaggaagagtacacctgctttgccaaatgaggtg
accgcctgcagtaggaaacctgactttggctttaagcgttactttttgccattacggttc
ctgagaaaaactgagaaaaggtcagatagtcgcacatccagatcatcctcagaatcaagt
ccacaagggtcttgcaagaagttacatttaatcaggcaatgtgcaggaagtcctgagcta
cacagggcacatgattactctttaccttcatctccatcttctgtacatctcccaaagact
ttactgagacaaagtgtccataacaatgttctgtctgctactccaaactcctggggcatg
ttaggattggagccagatgacttggtccactctatactagtacaacccctcacgctgtct
aaacctcgctctttttcctccccaaatgtggactcgtctgtctatgagaatgttttaaac
acaagtccacactatgaaaatattcaggttcgcctcttaacaccttccagtccgaacctg
agaaatctaagttcagctaatgacattgatggttatgtggatatgagcagtctaccaggt
tttcagagtaaaagcttgtcagctgagcaagagactgaaagtgcttacactacctgctct
cctctaataagatcagatggaactgtaagtgtatcacttggtgtagtaaatactaaagag
agagagaaaaatgcaaccaaaggactgactgtcaattgttctagaacattttacactgtg
aaagagctgctggacagcgaaactcagcatgtaaagactttaaagcttctaaatgagact
atagatgcagacaagcagctaaagaaactttggaataatatacctgcaatttacacactc
cacctggacctccaggctcaactggaaagttgcatcaaagagtggcatcagaaggaagga
attgctgacattttcctgagcaaaaaagctgagttttcagttttctcttcctacatcagt
gattacgaccaaaaaataaagactatggagcagatggaggacacacagctggacatcacc
actctgaaacagcagttactacaagtgatagtgagagttctacagtatcatatgctgcta
acagattacatgaaaaatctttcacaaaactccaaagagttagaggatacaaaagctgct
cagcttatggtctctggtgttactgattacacaaagaacagcctcaagaatgaggcggat
cttctgcgtctggtccatattgagcacagtgttcagggattgaaaaacctgctacagcct
ggaagggtatttgtgaaggaggggacgctgatgaaagtcagcaggaagtataaacagcct
cgccacctattcttgatgagtgatattttgttgtatacatacccccaacaagacggcaaa
tacagactcattaacacattagcacttacagagatggaggttactaaactgttgattgaa
aacactcaaaatggcttgaagattgaggtgaaagacattactatcactctgttagcaagc
tcctgtattgaaagagatgattggtttgtcacactaaatcggacaatagctgaccttggc
tcagttctggcagtacccgctggaggttatgaggttgacaagtctgtggcatgccttgga
gagaatgctccacctctggtctccgtttcccaagtagcagtatgtatgaactgccctgtc
cagttcagcctcacacaccgaaggcatcactgccatgcctgtggaaaggtggtgtgcaga
gactgctgcagaaacaaagtcccactgaaatacatgaagaaccgaaaagctaaagtgtgt
gataaatgctacagtgagctgtgcaaaaatgaaggagatgtcagcatgctaatagaaagc
agcagtcggccgctgtccacagtttttcaaaacattcacccaaccagtctgtggaagagt
cgcagaggtcatgcatcattcagccaggttaccgggtctgagggtgatatgagtgggact
ctgcaaaggagtcgaaacagtaagcggagctggaagagtctgtggtttcttcttaaggat
aaagtgctttatacatacccacagcctgaggagaggcttgcatgtgaatctcttcctctg
atggggttcacggtgaggtcagagagtgaaggagaaagcagcgtgtttcagctctaccat
gattctactctcttctacacattcagagctcaggacacacatactgcacagaggtgggtg
agcgccatggaagaggccactgttctttag
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