Trichomycterus rosablanca: 134317213
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Entry
134317213 CDS
T09921
Symbol
cyfip1
Name
(RefSeq) cytoplasmic FMR1-interacting protein 1 homolog
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
trn
Trichomycterus rosablanca
Pathway
trn04810
Regulation of actin cytoskeleton
trn05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
134317213 (cyfip1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
134317213 (cyfip1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134317213 (cyfip1)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
134317213 (cyfip1)
Factors involved in mRNA localization
Other mRNA localization factors
134317213 (cyfip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Cypovirus_WIV_4
Spore_SspJ
Motif
Other DBs
NCBI-GeneID:
134317213
NCBI-ProteinID:
XP_062854045
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All DBs
Position
6:complement(45542990..45591859)
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AA seq
1253 aa
AA seq
DB search
MTTSVSLEDALSNVDLLEELPLPDQQPCIEPLPSSIMYQPNFNTNFEDRNAFVTGIARYI
EQATVHSNMNEMLEEGQEYAVMLYTWRSCSRAIPQVKCNEQPNRVEIYEKTVEVLEPEVT
KLMNFMYFQRTAIDRFCGEVRRLCHAERRKDFVSEAYLFTLGKFINMFAVLDELKNMKCS
VKNDHSAYKRAAQFLRKMSEPASIQESQNLSMFLANHNKITQSLQQQLEVINGYDELLAD
IVNLCVDYYENKMYLTPSEKHMLLKVMGFGLYLMDGNSSNIYKLDAKKRINLTKIDKFFK
QLQVVPLFGDMQIELSRYIKTSAHFEENKSRWSCTSAGSSPQYNICEQMIQIRDDHMRFI
SELARYSNSEVVTGSGRQEAQKSDSEYRKLCDLALQGLQLLSQWSVQVMEVYSWKLVHPT
DKYSNKEFPDNAEEYERATRYNYTSEEKFALVEVIAMIKGLQVLMGRMESVFNHAIRHTI
YAALQDFAQVTLRDPLRQAIKKKKNVIQSVLQAIRKTICDWETGREPHNDPALRGEKDPK
GGFDIKVPRRAVGPSSTQLYMVRTMLESLVADKSGSKKTLRSSLEGPTIMDIERFFRESF
FYTHLLNFSETLQQCCDLSQLWFREFFLELTMGRRIQFPIDMSMPWILTDHILETKEASM
MEYVLYSLDLYNDSAHYALTKFKKQFLYDEIEAEVNLCFDQFVYKLADQIFAYYKIQAGS
LLLDKRLRAECKNQGALIQLPSTNRYETLLKQRHVQLLGRSIDLNRLITQRVSAALYKSL
ELAINRFESEDLTSIVELEGLLEINRLTHKLLSRFLTLDSMDAMFREANHNVSAPYGRIT
LHVFWELNYDFLPNYCYNSSTNRFVRTVLPFSQAFQRDKPPNAQPQYLYGSKSLNLAYSS
IYGFYRNFVGPPHIRAVCRLLGYQGTAVVMEELLKVVKSLLQGTILQYVRTLMEVMPKIC
RLPRHEYGSPGILEFFHHQLKDIVEYAELKTVCFQNLREVGNAVLFCLLSEQSLSQEEVC
DLLHAAPFQNILPRVHVKEGERLDAKMKRLEAKYTALHMVPLIERLGTPQQIAIAREGDL
LTKERLCCGLSMFEVILSRIRGFLDDPIWRGPLPSNGVMHVDECVEFHRLWSAMQFVYCI
PVGAHEFTVEQCFGDGLNWAGCMIITLLGQQRRYDILDFSYHLLKVQKHDGKDEIIKSVP
LKKMVDRIRKYQILNDEIFAILNKYMKSGDGENMPVEHVRCFQPPIHQSLASN
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctcagtgtctttggaggatgctctgtccaacgtggacctgctggaggagctt
ccccttcctgaccagcagccatgcatcgaaccgctgccctcctccatcatgtaccagccc
aacttcaacaccaactttgaagatcgcaacgcatttgtgactggcatcgcccgctacatc
gaacaagctacagttcactccaacatgaatgagatgttggaggaagggcaggagtatgct
gtgatgctctacacatggagaagctgctccagagctatccctcaggtgaaatgcaatgag
cagcccaacagagtggagatctatgagaagacggtcgaggtgctggagccggaagtcact
aagctgatgaacttcatgtactttcagcgtactgccatcgatcgtttctgtggcgaggtg
cgtcgtctgtgtcacgcagagcgcaggaaggactttgtgtccgaggcttacctgttcaca
ctgggcaagttcatcaacatgttcgctgtgctggatgaactgaagaacatgaagtgcagc
gtcaaaaatgaccactcggcctacaaacgagccgcccagttcctgaggaaaatgtcagag
cctgcttctattcaggagtcacagaacttatctatgttcctggccaatcacaacaagatc
actcagtccctacagcagcagctagaggtgattaatggttatgacgaactgctggctgat
attgttaacctctgcgtggactactatgaaaacaagatgtacctcacacccagtgagaaa
cacatgctgctgaaagtgatgggatttggtctgtatttaatggatggaaacagcagcaat
atctacaaactggatgctaagaagagaatcaatctcacaaaaattgacaagtttttcaag
caactgcaggttgtgccgctctttggagacatgcagatcgagctgtcccgctacattaaa
accagcgctcatttcgaagaaaacaaatccaggtggtcttgcacatctgcaggcagtagt
ccacagtataatatctgtgagcagatgattcagatccgggacgaccacatgcgtttcatc
tccgagttggcccgctacagcaacagtgaggtggtgactggttctggacgccaggaggct
cagaagtccgactccgagtacaggaagctgtgtgacctggcattgcagggcctgcagcta
ctctctcagtggagtgttcaagtcatggaagtgtattcctggaaattggtccatccaact
gacaaatactcgaacaaggaattcccagacaatgccgaggagtacgagcgtgccactaga
tacaactacaccagtgaggagaagtttgccctggtagaggtaattgccatgataaaggga
ttacaagtgctaatgggacgtatggagagtgtgttcaaccatgccatcagacacaccatc
tacgccgccctgcaggactttgcccaggtcacactgcgtgacccgcttcgtcaagccatc
aaaaaaaagaagaatgttatacagagtgtcctgcaagctatccgtaaaaccatttgtgac
tgggagacgggaagagagcctcataatgatccagctctgcgtggagagaaggatcccaaa
ggaggatttgacatcaaagtgcctcgtcgtgctgtgggtccctctagcactcagctctac
atggtgagaacaatgttggagtctctcgtagctgataagagcggctccaagaagactttg
cgcagtagcctggaaggccccaccatcatggacattgagaggttctttcgtgaatcattc
ttctatactcacctgcttaattttagtgagacactgcagcaatgttgtgacctgtcccag
ctgtggttcagggagtttttcctggagttgaccatgggccgtcgtatccagttccctatt
gatatgtccatgccgtggatcttgacggatcacatactggagactaaggaggcctcaatg
atggagtatgtgctgtattctctggatttatacaatgacagtgcgcactacgctctcacc
aagttcaagaagcagtttctttatgatgagattgaggctgaggttaacctgtgctttgac
cagtttgtctacaagcttgcagaccaaatctttgcctactacaagatccaggcaggaagt
ttgctattggataagagacttcgggcagaatgtaagaaccagggtgcgctcattcagttg
ccttccacaaatcgctatgagacacttctgaagcaaagacatgttcagcttttgggtcgt
tccattgacctaaaccgtctaattacccagcgagtctctgctgccctctacaagtccctt
gagttggccattaaccgctttgagagcgaggacctcacttccatagtggagttggagggc
ttgttggagatcaatcgattgacccacaaactcctcagtagatttctgactctggacagc
atggatgccatgttccgtgaggccaaccacaatgtatcggctccatatggcaggatcacg
ctgcatgtgttctgggaactcaactatgacttcctgccaaactactgctacaacagctcc
accaacaggtttgttcgtactgtgctgcccttttctcaggcgttccagcgagacaagcca
ccaaatgcccaacctcagtacctttatggctcaaagtccttgaacttggcgtacagtagt
atatatggcttctaccgaaacttcgtgggtccacctcatatcagagctgtgtgcagactg
ctggggtaccagggcactgctgtagtgatggaggagttgctcaaggtcgtcaaaagcctg
cttcagggcactattctgcagtatgtgagaactctaatggaggtgatgcccaagatctgc
cgtctgccacgccatgaatacggctctccaggcatcctggagtttttccaccaccagctg
aaggacatcgtggagtatgctgagctaaagactgtgtgcttccagaacctgagggaggtg
ggcaacgctgtgctcttctgcctgctgagtgagcagagcctgtctcaggaagaagtgtgt
gacctgttgcatgctgcacctttccaaaacattctccccagggttcatgtgaaagagggt
gagcggctggatgctaagatgaaacggctggaggccaagtacactgctctgcacatggtg
cctttaatcgagcgtctgggaacaccacagcaaattgccatcgctcgtgagggcgaccta
ctgaccaaagagaggctgtgctgtggactgtccatgttcgaagtgatcctctcccgcatc
cgtggtttcctggacgacccgatctggcgtggcccgttaccaagcaacggtgtgatgcat
gtggacgagtgcgtggagtttcacagactgtggagcgccatgcagttcgtgtactgcatc
cctgtcggagcacacgagtttactgtggagcagtgtttcggagatgggctaaactgggca
ggctgcatgatcatcactttactgggtcagcagagacgctatgacatactggacttcagt
taccacctgctcaaggtgcagaaacatgatggcaaggacgagatcataaaaagtgtgccc
ttgaagaagatggttgatcgtattcgtaagtaccagattctgaacgacgagatctttgcc
atcctcaacaagtacatgaaatctggggacggcgagaacatgcctgtggaacacgtccga
tgctttcagccgcccatccaccaatcactggcgagcaactga
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