Trichomycterus rosablanca: 134317218
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Entry
134317218 CDS
T09921
Symbol
cth
Name
(RefSeq) cystathionine gamma-lyase
KO
K01758
cystathionine gamma-lyase [EC:
4.4.1.1
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00260
Glycine, serine and threonine metabolism
trn00270
Cysteine and methionine metabolism
trn00450
Selenocompound metabolism
trn00670
One carbon pool by folate
trn01100
Metabolic pathways
trn01230
Biosynthesis of amino acids
Module
trn_M00338
Cysteine biosynthesis, homocysteine + serine => cysteine
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
134317218 (cth)
00270 Cysteine and methionine metabolism
134317218 (cth)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
134317218 (cth)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
134317218 (cth)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134317218 (cth)
Enzymes [BR:
trn01000
]
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.1 cystathionine gamma-lyase
134317218 (cth)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
134317218 (cth)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Cys_Met_Meta_PP
Aminotran_1_2
Aminotran_5
GDC-P
DegT_DnrJ_EryC1
Met_gamma_lyase
Beta_elim_lyase
Motif
Other DBs
NCBI-GeneID:
134317218
NCBI-ProteinID:
XP_062854050
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All DBs
Position
6:45820699..45842848
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AA seq
404 aa
AA seq
DB search
MASDKNQCGAAGFMPEFRSFATDALHVGQEPEQWQSMAVVPPISLSTTFKQFGPGQHAGY
EYSRSGNPTRNCLERAVAALDGAKHCVAVASGLAATMTIVHMLKARDGIVCMNDVYGGTN
RYFKKIAAEIGYDISFVDCTKLELLKAAFKPNTKLLWIETPTNPTMKVVDIKACSEIAHE
YNKDMIVVVDNTFMSAFFQRPLALGADICMYSATKYMNGHSDVVMGLISVIRDDLSEKLK
YLQNALGAVPSPFDCYMCNRGLKTLQLRMRQHFKNAMAAAQFLEADPRVDKVIFPGLPSH
PQHEVMKRQCTGCPGMITFYIKGKLEHATTFLKNLKLFTLAESLGGYESLAEHPAIMTHA
SVPEEVRVELGISDTLIRLSVGLEDEEDIIADLDQALAAAHEKK
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggcttctgacaagaaccaatgcggggcagctggattcatgccggagttcagatctttc
gcgaccgatgccctccacgtggggcaggagccggagcaatggcagtccatggccgtggtt
cctccgatctccctgtccaccacgtttaaacagttcgggcctggacagcatgctggttat
gagtacagtcggagtggaaatccaacacggaactgtctggagagggcagttgctgctctg
gatggggctaagcactgtgttgctgtcgcttctggattggctgccaccatgaccattgtg
cacatgctgaaagccagagatggaattgtgtgcatgaatgacgtatacggaggaaccaat
cgttattttaaaaaaattgctgcagagattggttatgacatctcctttgttgactgcaca
aagttggagttgttgaaggcagctttcaagcctaatacaaagctgctctggattgaaact
cccacaaacccaactatgaaagttgtggacattaaggcctgttcagagattgcccatgag
tacaacaaagacatgattgtggttgtggataacaccttcatgtcagcattcttccagcga
ccactagccctcggagctgacatctgtatgtactcggcaacaaagtacatgaatgggcac
agtgatgttgtcatgggcctgatttctgtcatccgtgatgacctctctgaaaagctgaag
tatttgcagaatgctctgggagctgtgccatctccgtttgactgctacatgtgtaatcga
ggactaaagactctgcagttgaggatgaggcagcacttcaagaacgcgatggccgcggcc
cagtttcttgaggctgatcccagagtggacaaagtcattttcccaggtctgccctctcac
ccacagcatgaagtgatgaagagacagtgcacaggctgtcctggcatgatcaccttctac
attaaaggcaaactagagcatgccaccacattcctcaagaacctgaagttatttacactt
gctgagagtctgggaggttatgaaagtctggctgaacatccagcaattatgactcatgcg
tccgtgcctgaagaagtgcgggtggagctgggcatcagtgatactcttatccggctctca
gtgggactggaggatgaggaagacattatcgcagacctggatcaagcccttgctgctgct
catgaaaagaaataa
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