Trichomycterus rosablanca: 134317250
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Entry
134317250 CDS
T09921
Symbol
lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7 isoform X1
KO
K24055
leucine-rich repeat-containing protein 7
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134317250 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
134317250 (lrrc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
LRR_4
LRR_LRWD1
LRR_5
LRR_NXF1-5
LRR_At5g56370
LRR_Zer-1
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
134317250
NCBI-ProteinID:
XP_062854114
LinkDB
All DBs
Position
6:51849372..51952336
Genome browser
AA seq
1442 aa
AA seq
DB search
MDDYSTLQLQCLEMTTKRKIIRRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERT
LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGIQEF
PDNIKCCKCLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE
LRENHLKTMPKSIHRLSQLERLDLGSNEFTELPEVLEQIHNLKELWLDNNSLQMIPGSIG
KLRQLRYLDLAKNRIETLDADISGCESLEDLLLSSNMLQQLPDTIGMLKKMTTLKVDDNQ
LTSLPNTIGSLSLLEEFDCSCNELEALPSTIGYLHNLRTFAADENFLTELPREIGNCKNV
TVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPYTFTKLKDLAALWLSDNQSKALI
PLQTEAHPETKQRVLTNYMFPQQPRHDEDYQSDSDSFNPALWEEQRQQRMTVAFDFEDKK
EEEDNAAKVKVEINLKRYPTPYPEDLKNMVKSVQNMVGKSVHPLATDKCMPGANMDLHAS
DSYEPKWPLPPKEVMEREVKDFSTPALPDQGVIMNSAIDIPKRKDKDDLNESSEISLHRI
VPKQQQAENCGLAVSPSSCLFFIDSMGGSPNDIRISDMRPTLVEPPMYKPKVVLLGQKDK
KESMDDSDPDKMHCMNNSGSSATYSDYSPSQGSSGSSNPPGNVSALQSAAKDGLPQTHWT
NRIAQSFPKPIETKPLLSHRETPPSSTLQQRGERRPLSDTFDSWNNAPHYDNTGFVAEET
PVVTPGGGSSGNPMLGTKPRSASVAQGRRPLMRQERIMGVPLELEQSAHPYRAPPDAEVP
PPPSQNPWQNWTRTPSPFEDRTAFPSKLEITPANSPNPDRKDFEQDHLPGTFPSSGAWGF
LNSRDSGTGQGPPNMYAHVQACNEPNKGTSMVVSRSSDRISPMMKEVKAKFKKSQSIDEI
DIGSYKVYSIPLDTYSSSIDNQGSVDRADLPGHLEQSMSRSQSAPMLDDDLDIYGTSKSS
QPQKPAIPKKVYQFDQSFNPQGAMDVMKQDRRVPPPFPNTPEYINHPGKTLPKELISPRG
YRGYQPMEQSMFSYPQPPINDDSVIPQFPSHPQRSRPGFLRRADSLVSSTEMALFRRVAE
AQEHQLADHYARSQQLKGILDHQNSLATMADSQFHKRNGRYEEDYSSYQEPKKPIMGYPT
KSLTQRRPLSARSYSTETYGASQARPVSARPTMAALLEKMPDYNVSMSLEKNLDNDMKMR
VAPPKPEDVGSKMPADWRQQLLRHIEAKRLDRTPSQQSNILDNGQEVVSPTTQWAPYSLG
RRDVPPDNTMVKKVVVPYPHQQQGVMGGGATAQHRGPQQYEGIMNKVSIQQYQNPLGMAM
TSTSPRPQSARCFIQTKGQKSMDGFPEQFCVRIEKNPGLGFSISGGISGQGNPFKPSDLG
TA
NT seq
4329 nt
NT seq
+upstream
nt +downstream
nt
atggacgattactcgacgcttcagttgcagtgtctggagatgacgaccaagaggaagatc
atccggcgcctggtgccgtgccggtgcttccgcggcgaggaggaggtcatctccgtgctg
gactactcgcactgcagcctgcagcaggtgcccaaggagatcttcagcttcgagcgcacg
ctggaggagctctacctggatgccaaccagatcgaggagctgcccaagcaactctttaac
tgccaggccctgcggaagctgagtatacctgataacgacctctccaacctgcccaccacc
atcgccagcctcgtcaacctgaaggaactggacatcagtaagaacggcattcaggagttt
cctgacaatatcaagtgctgtaaatgtttatcagtggtggaggccagtgtaaaccccatc
accaaactcccggacggcttcactcagctcctcaacctgacgcagctcttcttaaacgac
gccttcctcgagtacctacccgccaattttgggagattgtccaaattacgcatcctggaa
cttcgagagaatcacctgaaaaccatgccaaagtccatacacagactctcacagctggag
cggttagacctgggaagcaacgagttcacagagctgcctgaagttttggagcagattcat
aatctgaaggagctgtggctggataataactcgttacagatgataccgggttcgataggt
aaactgaggcagctacgctatctggatctggctaagaacaggatcgagacccttgatgcc
gatatttctgggtgcgagtcgctggaggacctcctgctttcatccaacatgctgcagcag
cttcccgacacgatagggatgttaaaaaagatgacgacattgaaagttgatgacaaccag
ctcacctcactgcctaacaccatcgggagtttatctctgttggaggagttcgactgtagc
tgtaatgagctggaggctttaccctcaaccatcggctacctgcataacctccgaaccttc
gccgccgacgagaacttcctgacggagttacccagagagatcggaaactgtaagaacgtg
acggtcatgtccctgcgctccaacaaactggagtttctgcctgatgaaatcggacagatg
acgaagctgcgggttcttaatctcagcgacaacaggttgaagaatcttccgtacaccttc
actaaactcaaagatcttgctgcactttggctctccgacaatcagtccaaggccctgatc
cccctacaaacagaggctcatcctgaaaccaaacagcgggtgcttaccaactacatgttc
ccccaacaaccccggcacgacgaggattaccagtcggacagcgacagctttaaccccgcc
ctgtgggaggagcagaggcagcagaggatgaccgtggcttttgacttcgaggataagaaa
gaggaggaggacaacgctgcaaaggtcaaggtggagattaatctgaagcgctaccccacg
ccgtacccggaggaccttaagaacatggtgaagtcggtacagaacatggtgggtaaaagc
gtgcacccgctcgccaccgataaatgtatgccaggcgccaacatggacctccacgccagc
gactcgtacgagcccaaatggcccctcccacccaaagaggtgatggagcgagaggtgaaa
gacttctcaacgccggcgctaccagaccagggcgtcatcatgaactcggccatcgacatc
cccaagaggaaggataaggatgatctgaacgagagctccgagatttctttacatcgcatc
gttcccaagcagcaacaggcagagaattgcggcctggccgtttctccgtcgtcctgcctc
ttcttcatagattccatgggaggctctcctaacgacatccggatctccgacatgaggccg
acgctggtggaaccgcccatgtacaagccgaaggtcgtactgctgggacaaaaggataaa
aaagaatccatggatgactcagacccagacaagatgcactgcatgaacaacagcggctcc
tcggccacctactcggactactcgccgtctcagggctcctccggctcctccaacccgccc
ggaaacgtctccgccctgcagagcgccgccaaagacggcctcccgcagactcactggact
aacaggatcgctcagtcgttcccaaagccgatcgagacgaagccgctgctcagccacaga
gagacgccgccgtccagcaccctgcagcagagaggtgaacggcggcccctcagcgacacc
ttcgacagctggaacaacgccccccattacgacaacacgggcttcgtggctgaggagacg
ccggtcgtgactcccggcggcggcagcagcgggaaccccatgctgggcaccaagcctcgc
agcgcctcggtggcgcagggccgacggcccctcatgcggcaggagcgaatcatgggagtc
ccgctggagctggagcagtcggcgcacccctaccgtgcgcctcccgatgccgaagtgcct
ccgcccccttcccagaacccttggcagaactggacgaggactcccagccccttcgaggac
cgcacggcgttcccgtccaagctggagatcaccccggcgaacagccccaaccccgaccgc
aaggacttcgagcaggaccacctcccgggcaccttcccctcgtcaggagcctgggggttc
ctgaactccagagactcagggacagggcagggtccgcccaacatgtacgcgcacgttcag
gcctgtaatgaacccaacaagggcaccagcatggtggtgagcagaagttctgacaggatc
tcgcccatgatgaaggaggtgaaggcgaagttcaagaagtcccagagcatagacgagatc
gacatcggatcctacaaggtctacagcatccccctggacacttacagctccagcatcgat
aatcagggtagcgtggacagagctgacctcccgggacatctggagcagagtatgtccagg
agccagtccgcccccatgctggacgacgaccttgacatctacggtacgagcaaatcctct
caacctcagaaacccgccattcccaaaaaggtttaccagttcgaccaaagtttcaaccct
caaggagccatggacgtcatgaagcaggacaggagagtcccgccgcccttccctaacacc
cccgaatacatcaatcacccaggcaagacgctgccgaaggagctaatcagccctcgaggg
taccgagggtaccaacccatggagcaaagcatgttctcctatcctcagcctcccatcaac
gacgattcggtcattccacagttcccgtcgcaccctcagcgttcccggcctgggtttctg
cgccgggccgactccctggtcagctcgaccgagatggcgcttttccgcagggtcgccgaa
gcccaggaacaccaactggccgaccattacgcccgatcccaacagctcaagggcatcctg
gatcaccaaaacagcttggccaccatggccgactcgcagttccacaagcggaacggtagg
tacgaagaggactactcgtcctaccaggagcctaaaaagcccatcatgggttaccccacc
aagagcctgacccagcgtcgccccctgtccgcccggagctacagcaccgagacgtacggc
gcctctcaggcccggcccgtgtccgcccggcccaccatggccgccctgctggagaagatg
ccggattacaacgtcagcatgagcctcgagaagaatcttgacaacgacatgaagatgaga
gtcgcccccccgaaaccggaggacgtgggttccaaaatgccggcggactggaggcagcag
ctcctgaggcacatagaggccaaacggctcgaccggaccccgtcgcagcagagcaatatt
ttagacaacggacaggaagtggtctctcccaccacgcagtgggccccctactcgctcggg
agaagagacgtacctccagacaacaccatggttaaaaaggtggtggtcccgtaccctcac
caacagcagggcgtgatgggaggcggagccacggcgcagcaccgggggccccagcagtac
gaagggatcatgaataaggtctccatccagcagtaccagaatcctctgggaatggccatg
actagcaccagcccccggccccagagcgcccgctgcttcatccagaccaagggccagaag
agcatggacggctttccagagcagttctgtgttcggatcgagaagaacccgggcctgggt
ttcagtatctcagggggcatcagcgggcaggggaaccccttcaaaccctccgacctaggt
acagcctga
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integrated database retrieval system
