Trichomycterus rosablanca: 134317271
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Entry
134317271 CDS
T09921
Symbol
rbm26
Name
(RefSeq) RNA-binding protein 26
KO
K13192
RNA-binding protein 26
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trn01009
]
134317271 (rbm26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134317271 (rbm26)
03041 Spliceosome [BR:
trn03041
]
134317271 (rbm26)
Protein phosphatases and associated proteins [BR:
trn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134317271 (rbm26)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
134317271 (rbm26)
Spliceosome [BR:
trn03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
134317271 (rbm26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
PWI
RRM_Nup35
RRM_PARP14_3
RRM_3
zf-CCCH
zf_CCCH_4
Motif
Other DBs
NCBI-GeneID:
134317271
NCBI-ProteinID:
XP_062854158
LinkDB
All DBs
Position
6:52312922..52348397
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AA seq
992 aa
AA seq
DB search
MFIENLEALKSWLSKTLEPICDADPSALAKYVVALVKKDKSEKELKALCIDQLDVFLQKE
TQTFVDKLFEAVNSKSYLPQPDHPSPAGKTETDARPEKDQQRKEEAVNRNDEREKKFSRR
VNHSPQPGSRYSRDSRRSDERKKDERFRKREYERLPPRRDSYRERYNRRRGRSYSRSRSR
SWSKERARDRERERERVRERERSRTRSRSPSRSRERESGKPKYDHERPEGGASEGYVAPP
LATVPASSHFPVPALSSTITVIAPTHHGNSTTESWSDFQPDHAPYGRGAPPPPRKRCRDY
DEKGLCMRGDMCPFDHGSDPVVVEANLPSILPFPPPGVDGPPPPRLPPPPSLLPPPPVNL
RPPGPPGSLPPVAGPPPPLPALDPPPNSMTGSVPSIVSSSRPLLPHPPLHLVTPGVRPPL
AQPPPRYPSDSFESDMYNPEAPSMTSRPPYRPRVHVQRPNLIGLTMGEPDLPPRDKPPNS
NNARIVLDSDSRKRGAGPHDGGVLPKRPWFDNLGFTPGSRPNYSRMNHHGYQKKVPPPLP
NTKLSVTHVPAELNSISKLNQHFSKFGKIVNLQVAYNKDPQSALIQFETPEEARRAIQST
EAVLNNRFIRVYWHRDQETTITLTHTPPTLNIQQPEATSLKQSVKDRLGPLPSRSTEPLQ
DATSPSQSSQSAARSVKQRLGFSKPAAPGGKVFSTSTGLTKTFYNPAAVTPGQKVAAVGK
APGTDEALKKKQEALKLQQDVRKKKQEILEKHIETQKLLISKLEKNRLMRAEDKAQLMQT
LTTLTNSISNLQQEIKCLSHTQLPIHPPHACIKSKAQAQKELLDTELDLYKKTQAGEDTA
QLKLRYTRLQLEAAKRGILTSGRGRGTHARGRGSARGRGIRGRPRGAPTHAVVDHRPRAL
VIGGFAEADRVDLLPHFAQFGEIEDCQMNDSSLSAIITFRTRTEAEQAAVHGVRLNHQVL
RLSWFKPAAALSSGDPDEAEPEEDEVSTFSAA
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgttcatcgagaacctggaggctctgaaatcatggctctccaaaacactcgaaccgata
tgtgatgctgacccctccgccctcgctaaatacgtggtggccctggtgaagaaggacaag
tccgagaaggagctgaaggcgctatgcatagaccagctggacgtgttcctgcagaaagag
acccagacgttcgtggataaactcttcgaggccgtgaactccaagagctacctgccccag
cccgatcatccgagcccggcgggcaagaccgagaccgacgcgcgaccagaaaaagaccag
cagaggaaagaggaggctgtgaaccgtaatgatgagcgtgagaagaagttctccaggaga
gtgaaccacagccctcagcccggctcccgctacagccgggacagcaggaggagcgacgag
cgcaagaaggacgagcgcttccggaagcgcgagtacgagcgcctcccgcccaggcgcgac
tcctaccgcgagcgctacaaccggcgcagggggcggagctacagccggagccgcagtcgc
agctggagtaaagagagagcgcgcgaccgagagagagagcgcgagagagtgcgggagcgg
gagcgcagcaggactcgctctcgcagcccctccaggagcagagagagggagtccggcaaa
ccgaagtacgaccacgaacggcctgagggcggagccagcgagggatacgtggccccgccc
ctcgccacagtacctgcctcctcccacttccccgtgcccgccctcagcagcaccatcacc
gtcatcgctcccactcaccatggcaacagcaccactgagagctggtccgacttccagccg
gaccacgccccctacgggagaggagccccgccccctccgcgcaaacgctgccgcgactac
gacgagaaggggctctgcatgcggggtgacatgtgccccttcgaccacggcagcgacccg
gtggtggtggaggccaacctacccagcatcctccccttccctcctccaggtgtggacggt
ccaccccctccgagactgccacccccaccctcactcctcccacccccgccggtcaacctc
cgaccccccggaccaccgggttcccttccacctgtagcaggtcctcctccacccctcccg
gcactggaccctcctccaaactccatgaccggctccgtcccctccatcgtgtcctcctct
cggccgctccttcctcatcctcctcttcacctggtcacgccgggggttcgccccccgctc
gcccagcccccgccccggtacccctcagattcgtttgagtcggacatgtataacccagaa
gctcccagcatgacctctcgacctccgtacagaccccgggttcacgtacagagacccaac
ctcatcggcctgaccatgggagaaccggatcttcccccgcgagacaaaccgccgaacagc
aataacgctcggatcgttttggattcggactccaggaagagaggggcggggcctcacgac
gggggagtccttcccaaaagaccctggtttgataatttaggcttcactcctggttccagg
ccgaactacagcaggatgaaccatcacggataccagaagaaggttcctccaccgctgccc
aacaccaagctctccgtcacgcacgtcccagccgagctcaacagcatcagcaagctcaac
cagcacttcagcaagttcggcaaaatcgtcaacctgcaggtggcctataataaggacccc
cagagcgccctgatccagttcgagaccccggaggaagcgaggcgcgctatacagagcacc
gaggccgtcctcaacaaccgcttcatcagagtgtactggcaccgagaccaggagacgacc
atcacactcacacacacaccacccacactgaacatacagcagcctgaagccaccagtctg
aaacagtcagtgaaggatcgcctcggaccgttaccctcccgcagcacggagcccctgcag
gacgccacgtcaccgtcacagtcgtctcagagtgcagctcgctcggtgaagcagcgcctg
ggcttctctaaacccgcagctccgggaggaaaggtcttctccacgtccaccggactcacc
aagaccttctacaacccggcggccgttacgcccgggcagaaggtggcggcggtcggcaag
gcgcccggcaccgatgaggcgctgaagaagaagcaggaggcgctgaagcttcagcaggac
gtgaggaagaagaagcaggagattctggagaagcacatcgagactcagaagctgctcatc
tccaagctggagaagaacaggttgatgagagccgaggataaagctcagctgatgcagacg
ctcaccaccctcaccaacagcatcagcaacctgcagcaggagatcaagtgtctctcacac
acacagctgccaatccaccctccgcacgcctgtatcaagagtaaagctcaggctcagaag
gaactgctggacaccgagctggacctgtataagaagactcaggctggagaggacacggct
cagctgaagctcagatacacacggctacagctggaggcggctaagcggggcattctgacc
tctggtcgtgggagggggacccacgcccggggtcgaggctcggcgcgcggcagaggcatc
aggggccggccgagaggggccccgacccacgccgtggtggatcatcgaccccgcgcgctg
gtgatcggcggcttcgccgaggccgaccgggtcgacctgctgccacactttgcgcaattc
ggcgagatcgaggactgtcagatgaacgactccagtctcagcgccatcatcaccttcaga
acccgaacagaggcagaacaggcggccgttcacggggtgcggctgaaccatcaggtcctg
cgtctctcctggttcaaaccggccgccgccctgagcagcggagatccagacgaagcggaa
ccggaggaggacgaggtcagtacattcagcgccgcataa
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