Trichomycterus rosablanca: 134317362
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Entry
134317362 CDS
T09921
Symbol
trim25l
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
134317362 (trim25l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134317362 (trim25l)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134317362 (trim25l)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
134317362 (trim25l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-C3HC4_4
zf-RING_UBOX
zf-B_box
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
RING_XB3-XBAT31
ANCHR-like_BBOX
zf-RING_2
Not3
DUF948
HisKA
PCRF
Motif
Other DBs
NCBI-GeneID:
134317362
NCBI-ProteinID:
XP_062854244
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All DBs
Position
6:52146499..52166169
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AA seq
829 aa
AA seq
DB search
MSRGRLWTEEQFNCPVCLDLPTDPVTIPCGHSYCMYCIADYWDSEHKKRGTCSCPECRQN
FDPRPPLCRNTMLAEAVEQLRLGNLSSAARESIRSARRAAASASERGARNPQATQKKPGT
SVSCDRCQDMREAVKTCLVCMASFCESHVKPHQTQDKFKSHELIAPTGDLTQKICPEHKY
LHEFYCRTCQLYVCWLCTSNKHKDHESVSTQVERTEKQKTIAAVQTENQQRLQERERELK
DMKKVLDTLMKESDEVNEESEVVLDELQRSVQRLADLIQQVMSSSGQEKISEVQQVVDKL
ETEVSQMKKKEVELKKLVTCQDNIHYLKTYQNLCSPELSEMGSVTANLDASFIPVRNIVL
DLREKVENMCNQELDKINKTVFNMSAFTVPTPQSNQKSGILKLFSGLGGKTANSRTQGPP
SLPSVSVRGPAPVTRNQDLKSPNQSQADRPRANHSRERADMSSSSLGPRERQRRNERLTE
SERQNQNSTRSSTGRNRNTGDDQEDDTVSVHSLQPQSSQRRAYRDQDTWSLSSSRSRDSR
LGDDGPTAGTAANRDERSSVREQQPPTRHQPERQSDRWSLSSLLPRNRKKRQESVNPGLF
LDSPSADSIRPAFPSLKEINIESIQAPEPRSRDEFLQYACDLTFDPKTAHRRLVLSEHDT
KAALQASAQPYPDTPERFDGWTQIFSLEPLSFTRCYWEVEWRGRGSSVGIACASMPREGS
DARAGLGYNDQSWSLELSDICYAALHGNQKQEIPMTYCPRVGVYLDREAETLTFYGVDDM
LVHLYTFSDVSFRQPLFAAFGVGSGVGVGLDFALGNFSSTTDSIKICAI
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgagtcggggtcgtttatggacggaggagcagtttaactgccccgtttgcctggattta
cccaccgatcctgtgacgattccatgcggccacagctactgcatgtactgcatcgccgat
tactgggactctgagcacaagaagagaggcacgtgtagctgccccgagtgccggcagaac
ttcgaccctcggccgcccctctgccgtaacaccatgctggcagaagccgtggagcagctg
cgcctgggcaacctgagctccgccgcacgagaatcgatccggagcgcacgccgagctgcc
gcgtccgcctcagaacggggagcgcggaacccacaagccacccagaaaaaacccggcacg
tcggtgtcctgtgatcggtgccaggacatgagggaggccgtgaaaacctgcctggtgtgc
atggcatcgttctgcgagagccacgtgaagccacatcaaactcaggataaatttaagagc
catgagcttatcgcaccgaccggtgacctgacacagaagatctgccccgagcacaagtac
ctacacgagttctactgccggacgtgccagctctacgtctgctggctgtgtacgagtaat
aaacacaaggaccacgagagcgtgtccactcaggtggagcgaactgaaaaacagaaaacc
atagcggcggttcagacggagaatcagcagcgactgcaggagagagaaagagaactcaag
gacatgaagaaagtcctggatacactcatgaaagaatccgacgaggtaaatgaagaatca
gaagtggtgctggatgagctccagcgttctgtgcagcgcttggcagatctgatccagcag
gtgatgagctccagcgggcaggagaagatcagcgaggttcagcaggtggtggacaaactg
gagactgaggtcagtcagatgaagaagaaagaagtagagctgaagaagctggtgacctgt
caggataacattcactacctcaagacgtatcagaatctttgctctccggagctcagtgag
atgggcagcgtgacggcaaatctggacgcctcgttcattcctgtacgcaacatcgtcctg
gatctgagggagaaggtggagaacatgtgcaaccaagaactggacaaaattaacaaaaca
gtcttcaacatgtcagctttcactgtacccaccccgcaaagcaaccagaagtccggaatc
ttaaaattgttttcaggactgggaggtaaaacagcaaacagccgaacacaaggaccacca
tctttgccctctgtaagtgtccgaggcccagcgcctgtaacacggaaccaggacctcaag
agtccaaaccagtcacaggctgacagaccgagagcaaatcacagcagagagcgagctgat
atgagttcgagctcgctgggtcctagagagagacagagaagaaacgagagactcacagaa
tcagagagacagaatcagaactcaacaagatcttcaactggacgaaacagaaacaccggt
gatgatcaggaggacgatacggtgagtgttcactccctacaaccacaatcatcacagagg
agagcctacagagatcaagacacgtggagtttgagctccagcagatcgagagacagtcgg
ctgggagatgacggaccgacggcaggtacagcagctaacagggatgaacggagctccgtg
agagaacagcaaccgccaaccagacaccaacctgagagacagtcggatcggtggagtctc
agctcactgttacctcgaaacaggaagaagaggcaagaatcagtaaatcctggattgttc
ctggattctccatctgcagactccatcagacccgccttcccatcactgaaggagatcaat
atcgagagtattcaggctcctgaaccgaggagcagagacgagttcctgcagtatgcctgt
gatttgacttttgaccctaagacggctcatcggcgattggtcctgagcgaacacgacacc
aaagcggcgctacaagccagcgcccagccgtaccccgacaccccagaacgcttcgacggc
tggactcagatcttcagcctcgagcctctcagcttcacccgctgctactgggaggtggag
tggcgtggacggggctcttcggtgggaatcgcctgcgcctccatgccccgcgagggctcg
gacgccagggcggggctgggctacaacgaccagtcgtggagcttggagctgtcggatata
tgctacgccgccctgcacgggaatcagaagcaggagatccccatgacctactgccccaga
gtgggcgtgtatctggaccgagaggcggagactctgactttttatggcgtggacgacatg
ctcgtgcacctctacacgttctccgacgtgtcgttcaggcagccgctgttcgccgccttc
ggggtggggagcggggtcggggtcggcctggattttgccctggggaacttcagttccacc
acagacagcatcaagatctgcgccatctga
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