Trichomycterus rosablanca: 134317615 Help Entry 134317615         CDS       T09921                                  Symbol ptch1 Name (RefSeq) protein patched homolog 1   KO K06225   patched 1 Organism trn  Trichomycterus rosablanca Pathway trn04340   Hedgehog signaling pathway Brite KEGG Orthology (KO) [BR:trn00001]  09130 Environmental Information Processing   09132 Signal transduction    04340 Hedgehog signaling pathway     134317615 (ptch1) SSDB OrthologParalogGFIT Motif Pfam:  Sterol-sensing TRA2_N Patched DcrB FapA_amyloid Motif Other DBs NCBI-GeneID:  134317615 NCBI-ProteinID:  XP_062854396 LinkDB All DBs Position 7:8299127..8392678 Genome browser AA seq 1448 aa AA seqDB search MASAANVSFEQENGEPDRPRLPRRRTRRNGRAAPPDLEYLQRPSYCDAAFALEQISEGKA TGRKASLWLRAKFQRLLFRLGCYIHKNCGKFLVVGLLIFGAFAVGLRAANLETNVENLWV EVGGRVNQELKYTRQKIGEESMFNPQIMIQTPRQHGENILTAEALKQHLDSAVKASRVQV YMYNRKWNLEQLCYKSGEVVTENNLAYQIIQNLHPCLIITPLDCFWEGAKLHSGTAYLPG RPALQWTNFDPMALIADLATITHQVDSWEEILVKADVGHGYMDRPCINPADPDCPFSAPN KNSTRPLDIARVLTGGCRGISKKYMHWQEELIIGGTLKNDSGRLLSGQALQTMFQLMTPK QMYEHLKGYDEVSHMNWNEEKAAAILEAWQRRYSEVVQQSVSINSSQKVLTFTTTTLEDI LKSFSSVSGIRIASGYLLMLAYACLTMLRWDCARSQGAVGLAGVLLVTLSVAAGLGLCSL IGISFNAATTQVLPFLALGVGVDDIFLLAHAFSETGQNKRIPFEDRTGECLKRTGASVAL TSISNITAFFMAALIPIPALRAFSLQAAVVVVFNFAMVLLIFPAILSIDLYRREERRFDI FCCFMSPCSNRVIQMEPQALGDLGHCTPPPSYSSHSFSQHTHITMQSTVQLRTEYDPRTQ AYYTTAEPHSQISVQPLHPNHNNNHNNNNSSTRDLISQATETGSEHPESSCAHWTFAAFA EKHYAPFLLQPTTKVVVIVLFLALLGVSLYGTTRVRDGLELTDIVPRETAEYDFLGAQFH YFSFYSMYVVTQRVDYARKQPLLYELHQRLGTVKYVLRDEQGQLPLMWLHYFNDWLQGLQ KAFDKDLKEGRITQGNYRNGSDNGILAYKLLVQTGRREKPINLNLLTRHKLVNADGIINP NAFYIYLTAWVSNDPVAYAASQANVRPHPTEWIHDRTDSIPINSLTIPAAEPIEYAQFPF YLNGLRETPEFVEAIESVRAICNNYSRHGVPSYPNGYPFLFWEQYVGLRHWLLLFISVVL ASTFLVCAVFLLNPWTAGIIVLVLSLMTVELFGMMGLIGIKLSAVPVVILIASVGIGVEF TVHVALAFLTAIGDRNKRAVLALEHMFAPVLDGAFSTLLGVLMLAGSEFDFIVRYFFAVL AILTVLGVLNGLVLLPVLLSYFGPYPEVTPVDGRSRLPTPTPEPFPPVVHFTMHPNHAAT STTGTGSDTSDSEYSSNSTGSGISHEMSHHDLQVSRGRTARAEEVQITTVPRPNSHHKQP ATPPAYTAGATDSKHQQHHHPPHPHHSQDAGPSLPHRHIGREPKREAGPRHAAPPHRRRT DAFESTGPCGPREHSAGRRPHSHNPYPHPIHPGSGPTYCQPITTVTASASVTVAVHPGMP AQTPHYPCYTSNDNCRTSEGAYAHDAHFPDPHVPFSEHRYSGDSTQEGLELQDLEFSSHT ESQTRASS NT seq 4347 nt NT seq  +upstreamnt  +downstreamnt atggcctcggctgctaacgtctccttcgagcaggaaaacggggagcccgatcggccgagg ttaccgcggagaaggactaggaggaacggtcgcgcagccccgccggatttggagtattta caacgtccgagctactgcgatgcagcgttcgcgcttgagcagatatccgagggtaaggcg actggaagaaaagcatcgctctggctcagagcaaagtttcagagacttctgttcagactc ggctgttacatacacaagaactgtggaaagtttttagttgtgggccttttaatatttgga gctttcgctgttggattgagggcagctaatctggaaacgaacgtggagaacctctgggta gaagttggtggcagagtaaatcaggagctaaagtacacgcggcagaagattggtgaggag tccatgtttaaccctcagataatgatccagacaccacgacagcacggtgagaacatcctg accgctgaagcactaaagcaacacttagactcggccgtcaaagctagcagagtgcaagtt tacatgtataacaggaaatggaatctggaacagttgtgctacaaatcaggagaagtcgtc acagaaaacaatttggcctaccagatcattcaaaatctacatccctgtctaatcatcacg cctctggactgtttttgggaaggtgctaagctacactcaggcacagcctatctccctggt agacccgctctgcagtggaccaacttcgacccaatggctctgattgcagatttggcaacc ataactcaccaggtagactcctgggaggagatattggtcaaggcagacgtaggtcatggc tacatggaccggccctgcataaacccagcggacccggattgccctttctccgcccccaac aagaactctactcggccattagacattgcccgagtcctgactggtggctgccgtggaatc tccaaaaagtatatgcactggcaggaagagctcatcatcggagggaccttgaagaacgat agtgggagacttctcagtggccaggctttgcagaccatgtttcagcttatgactcccaag cagatgtacgagcacctgaagggctatgatgaggtctcacacatgaactggaatgaggaa aaagcagctgccatcctggaggcctggcaaaggcgctattctgaggtggtccagcaaagt gtgtccatcaattcctctcagaaagtgctgacctttaccaccaccactctagaggacatc cttaaatccttctccagtgtcagtggaatccgcatcgccagtggctacttgcttatgctt gcctacgcgtgtctgaccatgttgcgctgggactgtgccagatcccagggggcagtgggg ctggccggcgtgctgctggtcactctgtccgtcgctgctggactcggtctttgctctctc atcggcatttcctttaatgctgctaccactcaggtgcttccatttcttgctcttggcgtt ggggttgatgacatctttctcctcgcgcatgcttttagtgagaccgggcagaacaaacgc atcccttttgaggaccgtacaggcgagtgtttgaagagaacaggggccagtgtggcttta acctcaatcagtaacatcactgctttttttatggctgccctcatccctatcccagcgctg cgagccttctctttacaggctgcggttgtggtggtgtttaactttgccatggtgctgctc atcttccccgccatcctgagcatcgacctttaccgacgagaggagcgccgctttgacatc ttctgctgcttcatgagcccgtgctctaaccgtgtaatccagatggagcctcaggcgctg ggcgacttgggccactgcacccctccaccctcctacagcagccacagcttctctcagcac acgcacatcaccatgcagtcgacggtgcagctgcgcaccgaatacgacccgcgcacgcag gcctactacaccacagccgagccacactcgcagatctcagtgcagccgcttcaccccaac cacaacaataaccacaataacaacaacagctccacacgcgacctgataagccaggccacg gagacggggtcagagcacccagagtcctcctgtgcgcactggacgttcgccgccttcgcc gagaagcactacgcaccgtttctgctgcaacccaccacaaaggtggtggtgattgtgctg ttcctggctcttctgggcgtcagtctgtacggcaccacacgagtgcgggacggcctggag ctgacggacatcgtgccgcgcgagacggccgagtacgacttcttgggcgcgcagttccac tacttctccttctacagcatgtacgtggtgacacagcgggtggactacgcccggaaacag ccgcttctctatgagctgcaccagcgcctcggtaccgtcaaatacgtgctgcgagacgaa caaggccagttaccgctcatgtggctccactacttcaatgactggctgcaaggcttgcag aaagcctttgataaggacttgaaggaaggccggatcactcaggggaactacaggaatggc tcagataacggcatcctggcctacaagctcctggttcagacaggccgccgagaaaagccg atcaacctcaacctgcttaccagacacaagctggtgaacgcggacgggataatcaacccc aacgccttctacatctacctgactgcatgggtcagtaacgatccagtggcctacgctgcc tctcaagctaacgttcggcctcatcccaccgagtggatccatgaccgcaccgactccatc cccatcaacagcctcacaattcctgctgcagagcctatcgaatacgctcagtttcccttc tacctcaatggactacgtgagaccccagagtttgtggaggctatcgagagcgtgcgtgcc atctgcaacaactacagtcgccatggagtgcccagctaccccaatggctacccattcctc ttttgggagcagtacgtaggtcttcgccactggctgctgctcttcatcagtgtggtgctg gctagtaccttcctcgtctgtgccgtctttctgctcaacccctggactgctggcattatt gtgctggtgttgtcgctgatgacagtggagctgtttggcatgatggggctgattggcatt aagctcagtgctgtacctgtggtcatccttattgcttctgtgggcattggtgtggagttc acagtccatgtggccctggccttcctgacagccataggggacagaaataaacgggcagtg ctggcactggagcacatgtttgctcccgttctggacggagccttctctaccctactggga gtgctaatgctggcaggatctgagtttgacttcatagtccgatatttctttgctgtatta gccatcctgactgtgttgggggttctgaatggactggtgctgctcccggtcctattgtcc tatttcggcccttatccagaggtgactccagtggacggacgaagccgattgcccactcca actccagagccatttccaccagtggtgcacttcaccatgcatcccaaccacgccgccact tccaccactggaacaggctcagatacctccgactcagagtacagctccaactccacggga tcagggatcagccatgagatgtcgcaccatgacctccaggtcagcagggggcgaactgca cgagctgaagaggtacaaattaccactgtgccgcgaccaaacagtcatcacaaacagcca gcaactccaccagcttacacagctggagcgactgactctaaacaccagcagcatcatcac ccccctcatcctcatcactctcaggatgcaggaccttcccttcctcaccgacacattggc cgagagccgaagcgggaggcgggacccagacatgccgctcctcctcacaggcggcgcaca gacgcttttgaaagcaccggcccttgtggcccgagagaacattcagcgggccgacggcct cattcccacaacccttaccctcaccccatacaccccggctcaggtcccacctactgccaa cccatcaccacggtgacggcttcagcctctgtcacggtggccgtccatccgggcatgcct gcccagaccccccactacccctgctacacctctaatgacaactgccgcacttccgaagga gcctacgctcacgacgcgcacttccctgaccctcacgtgcctttcagtgagcaccgctac agtggagactcgacgcaggagggcctggagctgcaggacttagagttcagctctcacacc gagagccaaaccagagcctccagctga

DBGET integrated database retrieval system