KEGG   Trichomycterus rosablanca: 134317777
Entry
134317777         CDS       T09921                                 
Symbol
bcas2
Name
(RefSeq) pre-mRNA-splicing factor SPF27
  KO
K12861  pre-mRNA-splicing factor SPF27
Organism
trn  Trichomycterus rosablanca
Pathway
trn03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    134317777 (bcas2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:trn03041]
    134317777 (bcas2)
   03400 DNA repair and recombination proteins [BR:trn03400]
    134317777 (bcas2)
Spliceosome [BR:trn03041]
 Complex B
  Other components
   Prp19 complex
    134317777 (bcas2)
 Complex C
   Prp19-CDC5 complex
    134317777 (bcas2)
DNA repair and recombination proteins [BR:trn03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    134317777 (bcas2)
SSDB
Motif
Pfam: BCAS2 DUF7235 INO80F Cep57_CLD Tup_N THOC7
Other DBs
NCBI-GeneID: 134317777
NCBI-ProteinID: XP_062854577
LinkDB
Position
7:21142605..21150798
AA seq 225 aa
MSGASSVAGEVFVDALPYFDQGYDAPGVREAAAALVEEETRRYRPTKNYLSYLPTPDFSV
FETEIMRNEFERLAARQPMELLSMKRYELPAPSSGQKNDITAWQECVNNSMAQLEHQAVR
IENLELMAQYGTNAWKLSNDNLAFMIENAQKELQKVRKQIQDLNWQRKHDQLTGGAKLRE
LESNWVSLVSKNYEIERAIVQLENDVAQLKQQQGDENKENIRQDF
NT seq 678 nt   +upstreamnt  +downstreamnt
atgtctggagcgtcttcagtagcgggtgaagtgtttgtagacgctttaccttatttcgac
caaggctatgatgctcctggagtcagagaagcagctgcagctttggtggaggaggaaacg
aggcgatacagacctacaaagaattacctgagttacctgccaacacctgatttttcagtt
tttgaaacagagatcatgaggaacgagtttgaaaggcttgcagcgcgccaacccatggag
cttctcagtatgaagagatacgagctgcccgccccatcttcaggccaaaagaatgacatt
acggcttggcaggagtgtgtgaataactcgatggctcagctggaacaccaagcagtacgc
atagaaaaccttgaactcatggcacagtacggtactaatgcctggaagttgtcaaatgat
aacttggctttcatgattgaaaatgcacagaaggagctgcagaaagttcgaaagcaaatt
caggatctgaattggcagcgtaaacatgatcagctaacgggaggcgccaaactgcgagaa
ctggagtcaaactgggtgtccctggtgagtaagaactacgagattgagcgtgccattgtg
cagctggagaacgatgttgctcagctgaaacagcagcagggagacgagaataaggagaac
atcagacaagatttctag

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