Trichomycterus rosablanca: 134317827
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Entry
134317827 CDS
T09921
Symbol
irx5b
Name
(RefSeq) iroquois-class homeodomain protein IRX-5b
KO
K24889
iroquois-class homeodomain protein IRX
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134317827 (irx5b)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
134317827 (irx5b)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
DUF7365
Motif
Other DBs
NCBI-GeneID:
134317827
NCBI-ProteinID:
XP_062854646
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Position
1:32439456..32443484
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AA seq
417 aa
AA seq
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MAYPQGYLYQASNTLALYSCPSFGSGALSVPRTDELGRGNSGSAFAPYAGSTAFSSQTAA
FTSLQYGSEPATAPQFSSFVGSPYEASAGLAASLGYPHPYAAPLPGFSLGDPAYRKNATR
DATATLKAWLSEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWTPR
NRSEDEDEEDNIDLEKNDDEENPIKTAEMAESTKELGLQVNPALLPAEKHTDDEADRIIN
TSSPRNRDSSAPTTSSPKVVSDRVGSETLSDLGEPPSRLNAPGESGHPISVIHSTNPTPK
PKLWSLAEIATSDKTERDRTQTCGGAQSPLIISNSAFSPSRSPTRGPPLLPRHLYYASAF
YPAFTNYSAFSPAAARTSNPLCGNGLIEPGLHRALRANNPAAQICKDITHEEEDCKR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcatatcctcagggctacttgtaccaggcgtccaatactctggctctgtactcatgt
ccttcatttggctcgggtgcgttatctgttccgcgcactgatgagctgggcagaggaaac
tccggctctgctttcgctccttacgcaggatctacagctttcagtagccagactgcagca
ttcacctcgctccagtatggatctgaacctgcgacagctccccagttctcctcattcgtg
ggttctccgtatgaagcgtctgcaggtctggctgcatctctgggttatcctcatccgtac
gccgctccgctgccaggcttctccctcggagacccagcttatcgcaaaaacgctacccgg
gatgccactgccactctcaaagcttggctgagcgaacacagaaagaacccgtaccccacc
aagggcgagaagatcatgctggctatcatcaccaaaatgaccctcacccaagtgtccacc
tggtttgccaacgcgcgcaggaggctgaaaaaggagaacaagatgacctggactccgcga
aacagaagtgaggatgaagacgaggaagataatatcgacctagagaaaaatgatgatgaa
gagaacccgattaaaacagccgagatggcagagtcaaccaaagaattgggccttcaggtg
aatccagcacttctgcctgcagagaagcacaccgacgacgaagcggatcgtataattaac
acctccagtccgaggaaccgagactcatcagcacccacgacgtcatctcctaaagtcgtg
tcggacagagtgggatcagagaccctctcagatttgggagagccaccgagcagactgaat
gcaccgggcgagagcggccaccccatatctgtcattcattctacgaacccgacccccaaa
cctaaactgtggtctctggccgagatcgctacatcggataaaaccgagagagatcggacg
cagacttgcggaggcgctcagagtccgctcatcatcagtaacagtgcgttctccccctcc
cgatctcccacacgaggacctcctttactccccagacatctttactacgcgtccgctttt
tatcccgcattcacgaactacagcgccttcagcccggcggcggctcgcacctccaacccg
ctctgtgggaacggattaatcgagcctggtttgcacagagcactcagagcaaacaaccct
gcagctcagatctgcaaagatatcacacatgaggaggaagactgcaaacgctaa
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