Trichomycterus rosablanca: 134317972
Help
Entry
134317972 CDS
T09921
Name
(RefSeq) uncharacterized protein LOC134317972
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134317972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134317972
Enzymes [BR:
trn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
134317972
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
134317972
Prokaryotic type
134317972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5578
HhH-GPD
NUDIX_4
HHH
ARM_ARMC5
Drf_GBD
Fis1_TPR_N
Adaptin_N
EndIII_4Fe-2S
HEAT_2
Nipped-B_C
SAC3
ELMO_ARM
Motif
Other DBs
NCBI-GeneID:
134317972
NCBI-ProteinID:
XP_062854791
LinkDB
All DBs
Position
7:2861791..2894916
Genome browser
AA seq
855 aa
AA seq
DB search
MSSSKCQAAAGRLLDFLREWDRGNKVVRRRMLQTFLLQNTGKTSPELELEFSQAASLFLA
RICAWMRLTYMFGTCLDLQLKALKVFLSATSNHRYLLEFLEVGGMMTLLEVLKQDRTKEG
EKAEALQLLSIIANTGYKYKEVVCESYGVKVVAECLVKSRSEETQRSAINLLESLAHGNL
RYQKQVYKGLIALLACRNPTAQQLVLHTLRKVQTFVKSAHPAIVEPLLDLLRSFHLEVQC
GAIELIIELQQTEVRDVLLSALLALLKPTRDGTHKHKILQDPEMIKMTEPLPVYVQQAAA
AKTLRMLAEGKRETSEELVQRGVVHHLLYAMGNQEHAEAQIQASLALEHFVRSYPEVEEQ
VRSAMGSDLFNSFMHNAELLYISMDEVQADILLSNKVEVSSEMKERTAATEEDADVRTYA
VWVSEVMLQQTQVATVIDYYNRWMKKWPTVQELAGASLEEVNQMWSGLGYYSRGRRLHEG
AQKVVRDLDGKMPKNAEDLLKQLPGVGRYTAGAISSISLGEVTGVVDGNVTRVLCRVRAI
GADSTSTRVTVALWKLAGTVVDPERPGDFNQAMMELGATVCTPKSPLCTQCPVESHCHAN
RKVRSLQQRDSQRLLGKSDSTSDSPVPDIENCLSAGHCKLCLSEDWNTELGVQNFPQKPV
KKAPRVERTLVYVLQRQSNDGETQFLLTQRPSTGLLAGMWELPSVLLEEGVSEKKHRDLL
NTEMKRILGRSPPAESFQYVGEVVHIFSHIHQTYVVYSAAVCVSTDEDKEQKICWLTRSA
LQEAAVSSGVRKIIKLYSESTNNLDTNNLDTKNKKQISEAGNSKKTKQSRKRGANNDPKQ
LSLSQFFTSSKQTRT
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcagtaaatgccaggccgccgcaggccgtctgctggacttcctgcgtgagtgg
gatcgtgggaataaagtcgtacgcagacggatgcttcaaacgtttctgctacaaaacacg
gggaagacgagtcctgagctcgagctggagttcagccaggccgccagtctgttcctcgct
cgcatctgtgcctggatgagactcacctacatgttcggcacgtgtctggatcttcagctc
aaagctctgaaggtttttctctccgctaccagcaatcaccggtacctgctggagtttttg
gaggtgggaggcatgatgaccctgcttgaggttcttaaacaggatcggaccaaggaagga
gaaaaagctgaagctcttcaactgctcagcatcattgccaacactggatacaagtacaaa
gaggtcgtctgtgaaagctacggtgtgaaggtcgtagctgagtgtctggtgaagtcccgc
tcagaggagactcagcgctcggcgatcaacctgctggaatctctggctcacgggaacctc
aggtaccagaagcaggtgtataaaggtctgatcgctctgctggcctgcagaaaccctaca
gctcaacagctcgtgcttcacaccttacgcaaagtgcagacttttgtaaaatcagctcat
ccggctatagtggaaccactgctggacctactgcgctcgtttcatctggaggttcagtgt
ggagctatagagctgattatagagctgcagcagacggaggtgagagacgttctgctcagc
gctctgctcgctctactcaaacctaccagagatggaacccacaaacacaagatcctgcag
gatccagagatgataaagatgacagagccattaccagtgtacgtccagcaggcagcagca
gccaaaactctacggatgttggctgagggaaagcgggagacgtcagaggagctggtccag
cgtggagtggtgcatcatttactctacgccatgggcaatcaggagcatgcagaggctcag
atacaggccagtctggctttggagcatttcgtgcgctcctaccccgaggttgaggaacag
gtacggagtgctatgggatctgatctctttaactccttcatgcacaacgcagagctcctg
tacatcagcatggatgaagttcaagcagatattttactgtccaacaaagtggaagtttca
agcgaaatgaaagagcgaactgcggcgacggaggaggacgcagacgtcaggacctacgcg
gtgtgggtgtcggaggtgatgctgcagcagactcaggtggccacagtcatcgattactac
aacagatggatgaagaaatggccaacagtgcaggaactggctggagcttcactagaggag
gttaatcagatgtggtccggactggggtattactcacgcggacggagactgcatgaagga
gcgcagaaggtggtgcgtgatcttgacggtaaaatgccaaaaaatgctgaagatcttctc
aagcagctgcctggagttggccgatacacagccggggcgatcagctccatctcactggga
gaggtgactggggtcgtggatggaaatgtgacccgggttctgtgtcgggtccgggcgatc
ggagcggacagcaccagcactcgcgtcactgttgcactctggaaattagcaggtaccgtg
gtggatccagagcgaccgggcgattttaaccaggcgatgatggaacttggggcgacggtg
tgcaccccaaaatctcctctctgtacccagtgtcctgtagagtctcactgtcacgctaac
agaaaggttcgatcgctacagcagagagactcccaaagacttctgggtaaatcggactcg
acctcggacagccctgttcctgatatagagaactgcttgagtgctggtcactgtaagctg
tgtctctctgaggactggaacactgaactcggggtgcagaattttccccagaaaccagtg
aagaaggcgcctcgtgtggagcgaacgctcgtctatgtcctgcagcgacagagtaacgac
ggagagactcagttcctgctcacacagagacccagtacagggctactggcaggaatgtgg
gagttacccagtgtgcttttggaggagggcgtgtctgagaagaaacacagagacctgtta
aacacagagatgaagaggattctcgggcgctctcctcctgcagagtcatttcagtacgtc
ggagaggtggttcatatcttctcacacatccaccagacgtacgtggtgtacagcgcagcg
gtttgtgtttctactgatgaggacaaagagcagaagatctgctggctcacccgttcagcc
ctgcaggaggccgccgtatcctccggcgttagaaagatcattaagctttattctgagtcc
acaaacaacctggatacaaacaacctggatacaaagaataagaagcaaatctctgaggct
ggtaacagcaagaagaccaaacagtcgaggaaacgaggggccaacaacgacccgaagcaa
ctttcactcagccagttcttcacctcctcaaaacaaaccagaacctga
DBGET
integrated database retrieval system
