Trichomycterus rosablanca: 134318000
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Entry
134318000 CDS
T09921
Symbol
prdm2a
Name
(RefSeq) PR domain zinc finger protein 2
KO
K11432
[histone H3]-lysine9 N-trimethyltransferase PRDM2 [EC:
2.1.1.355
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn00310
Lysine degradation
trn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
134318000 (prdm2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134318000 (prdm2a)
03036 Chromosome and associated proteins [BR:
trn03036
]
134318000 (prdm2a)
Enzymes [BR:
trn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.355 [histone H3]-lysine9 N-trimethyltransferase
134318000 (prdm2a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
134318000 (prdm2a)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
134318000 (prdm2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_4
zf-C2H2
zf-C2H2_6
zf-C2H2_ZNF462_1st
zf-C2HE
Motif
Other DBs
NCBI-GeneID:
134318000
NCBI-ProteinID:
XP_062854814
LinkDB
All DBs
Position
7:14098968..14106051
Genome browser
AA seq
1582 aa
AA seq
DB search
MVKWVPYCCCSICDAALCNTLSLTGNKKSQIEQERWCGPAQQVVKRSQCDTCDSENVKTD
ELPVSPKEKQQSVTLCPTENRQLCHTGKHLLYVCEEVEVGENVGEPDKTMEHCVEDLNIS
HAETTRQPPMEDVPLLTMDVINQHPSCQTNETEDLEITKPEHGSDFSSETGANQAPDCDP
ESNPDTDLQGLCSFFCQHCQRRFSTRQGLECHIHTPASCHTQTFKCRHCRMCFRTQFGRR
RHERRHDSANRTGVLKIPSVKRVGENTGVVTSEEKDQSALSSQPVVHLSGPNSVRTGGSD
GSGDAKGAFVCKYCKKAYGTHTNLRRHERRIHERRLLPRSVNSNAKSPQELQSQQPDGLA
EASLIASTHPNEETKQEEYMVDISSNISENLSFYIDGKIISTSAVTNCEVMEVNSASTVL
DLDALIINPCHMTLDPSGQPSVRRRTSTPPLLPQIKIELESESILTTSSSNTEGTLIGTV
LPRPLETIVFQKDKMIYLSPKLKQLLQNQGNNKSTFSLFTEGQKFCPSLTVLPATTSRFR
RRTSSPPLPSQQSTTSELNTTMAQEELSPVLKVPEMDIHYTSSAVINLTKKDEIQAEIPP
INDNAASQHVLPLDCSASGTGGRSCNQQPLDLSNTVAKNDPEVFEECALDLSMNRKSSES
DSPECSAFQLQVRRTKPNSSMLEKVLLDQYAVVDVPAIADALITSDHVVTNPAVMTDPVN
TNPERVMFELSPASSDALHLTPSALTPAVLHTVPLTQTFSELNTFTQVPNEVFVPVSTPI
TSELVRPSSDAQCSIPVVPPAPVEMTVGNPLTAFNVSIPDWLNCASGGMTHALLPTALPL
GLQGPQISTDPSGCELAQRTLVMTCNDSVLSPEAQLFSPSLLINQANITSLSIPPNVFVI
EYTVALESTNSNPVLQTNAINCLFDKTPPEPNDPPELQSSSQPLTDNTEPSVPELTEACT
DEPQDLQLDSPTNVASLDNPEAEDLSSFDSNPRETMETEPALTDGSTCSFSPEEASEISV
QHHSLSEEQITLPRLCKRFLCNACDESFQSMKGLSQHISEHSDTWPYKCEFCVQLFESET
GLLEHRSSYHGIGKIYVCRVCSKEFAFLCNLEQHHRDLHPGQECSHTEVENGKLRPENHN
SPLKVDSATSVSPKNDKNQFKSSPKAEEDTNSENTTEEIYTTIKIMATEGVKPKGTDVRL
GINQHYPSFKPPPFPYHNRSPVGMTNTTATNFSTHNIPQTFSTTIRCTKCGQGFDNMPEL
HTHILACANASDKKRYTPKKNPIPLKQIAKVQNGVLLPARGVNLRQNASQKLGQLKKFTS
NESDAKMKLNSHNKKKSLWVHRGKPVGRKASQEGLEVFNCPHCSREFTYPASLKKHMAIS
CPLRPVCRKLKKRKASMALAQENNGRFRPRVAEVIMKSQRLNQGQKTIAKIQTKESGSAK
FTSLPVKTHIGKGKITVHNFRPKRSDVLSGSAVHLGKKSKLILMEAIQSPLASNKYPTTI
RKLQQLSNRVQGVGREIKQDEVEMRERTAGPVTRSLQQANGTLNNTPNNTNKRTNHGGMT
DRQNGTANQPGVDLKKSKDKLN
NT seq
4749 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaatgggttccttactgctgctgctccatatgtgatgcagccctctgtaatacc
ctgtctctcactggcaataagaagtctcaaatagagcaagagaggtggtgtggtccggcc
caacaagtggttaagagaagccaatgtgacacgtgtgattctgaaaatgtgaaaacagat
gagctgcctgtttctccaaaggagaagcaacaatccgtaacactgtgtcctactgagaat
cgtcagctgtgtcatactgggaaacacctcctttacgtgtgtgaagaagtagaagtgggt
gagaacgtgggagagccagataaaacaatggaacactgtgtggaggatctgaacatctcg
catgcagagacaaccagacagccacctatggaagacgtacctttactaaccatggatgta
ataaatcaacacccatcctgtcaaacaaatgagacagaggacttggaaattaccaaaccg
gaacatggctcagacttctcgtctgagacaggtgctaaccaggccccagattgtgacccg
gagagtaaccctgacactgacctccagggattatgctcatttttctgtcagcactgtcaa
agacggtttagtactcggcaaggcttggaatgccacatacataccccagcatcctgccac
acacagacatttaaatgccgccactgtcgaatgtgctttaggacgcagtttggcagacgg
cgacatgaaagaaggcacgatagcgcaaataggacaggtgttctcaaaattccctctgtg
aagagagttggagagaatacaggggttgtcacttcagaagaaaaagaccagagtgccctg
tcttcacaaccagtcgtacacctttctgggcctaattcagtaagaactggtggctcagat
ggaagtggggacgctaagggtgcttttgtctgcaagtactgcaaaaaggcttatggcact
cacactaacctgagaaggcatgagcgcagaatacatgaacgtcgactcctaccaagaagt
gtcaattcaaatgctaaaagtcctcaggagcttcaaagtcagcagcctgatggtttggca
gaagcttctttaattgctagtactcaccccaatgaggagaccaaacaagaagagtacatg
gtcgatatttccagcaacatctctgaaaacctcagcttttacattgacgggaaaatcatc
tcaaccagtgctgttacaaactgtgaagtgatggaggtaaattctgcttctactgtgctt
gacctggatgccttgataatcaacccatgccacatgacccttgacccctctggccaaccg
tctgtcagaagaaggacatctaccccacctttattgccacaaataaaaattgaattagag
tctgaatctatcttgacaacatcttcctcaaacacggaaggtactttaattggcaccgtt
ttgcccaggccgttagagactattgttttccaaaaagacaaaatgatttatctgtccccg
aagctgaagcagcttttacagaaccaaggcaacaataagtcaacattttctttgtttact
gaaggtcaaaaattctgtccgtcattaactgttttacctgcaacgactagcaggtttagg
agaagaacatcatctcctcctttgccttcacagcaaagcactacgtctgagttaaatacc
actatggctcaggaggagctttctccagtacttaaggtgccagagatggacatccactac
acttcttctgctgtaataaaccttactaaaaaagatgaaatacaagcagagattccacca
ataaatgacaatgctgccagtcagcatgttctgccattggactgctctgcatctgggact
ggtgggaggtcatgcaatcagcagccactagacctctccaacactgtggcaaaaaacgac
cccgaggtctttgaagagtgtgctctggatctgagcatgaacagaaagagttctgagtct
gactcaccagaatgctcagccttccagttacaagtcagaagaacgaaacctaactcaagc
atgttggagaaggtcctactagaccagtatgctgtcgtagatgtccctgcgattgcggat
gcattgattaccagtgatcatgtagtaacaaatcctgcagtaatgactgacccagttaat
actaatcccgaaagagttatgtttgagctgtctccggcctcgtctgatgcactgcaccta
accccttcagcacttactcctgctgtattgcacactgtacctttaacccagacattttca
gaactaaacacatttactcaagtacccaatgaggtttttgttccagtttccacacccata
accagcgagctggttcgcccaagttctgatgctcagtgttccattcctgtagttccccca
gctcctgtagaaatgactgttggaaatcccttaacagcttttaatgtgtctattcctgat
tggcttaattgcgcgtctggtggtatgactcatgcacttttgcccacagccctgcctcta
ggtttgcaaggtcctcagatttctacagatccatctgggtgtgaactagcacaaagaact
ttagtgatgacatgtaatgattctgtcttgtcacctgaagcacagctattttctccgtct
ttgttgatcaaccaggcaaacatcacctccttaagtattcctccaaatgtatttgtcatt
gagtatacagtcgcactggagtccactaattccaatcctgtcttgcaaactaatgccatc
aactgtctctttgacaaaactccaccagaacccaatgacccaccagagctccaatcttca
tcacaaccactgactgacaacactgagccctcggttccagaactgacagaggcttgcact
gatgagcctcaagatttgcaactggactcacccactaatgtagcctcattagataatcca
gaagctgaagacctatcatcgtttgattctaatccccgagaaacaatggagactgaacca
gcacttacagatggttcaacatgctcttttagtcctgaagaggcttcagaaatttctgta
cagcaccactctttgagtgaggaacaaataaccctgcctcgtctgtgcaagcgcttcttg
tgcaatgcttgtgatgagtcttttcagtccatgaagggtctgagtcagcacatcagcgaa
cactcagacacttggccatataagtgtgagttttgtgtgcagttatttgaaagtgaaact
ggtttactggagcaccgatccagttatcatggcattggtaaaatatacgtttgcagagta
tgttctaaagagtttgcctttctttgcaacctcgagcagcatcatcgagacctccatcct
ggtcaggagtgctcccacactgaggtagaaaatggtaaactgagacctgaaaatcataat
agtcccttaaaagtggattctgcaacctcagtgagccctaaaaatgacaaaaatcagttc
aaatcctctccaaaagcagaggaggacactaacagtgagaacactactgaagagatatac
accactatcaaaatcatggcgactgaaggcgtcaaacccaagggtacagatgtgcgcctg
ggtattaaccagcattacccgagttttaagccacctccatttccttaccacaaccgcagt
ccagtcggaatgacaaatacaactgcgactaacttcagcactcataacatcccacagacc
tttagcaccaccattcgctgcactaagtgtggccaaggctttgacaacatgcctgaactg
cacacgcacatattagcctgtgctaatgccagtgacaaaaagcgctacactccaaaaaag
aaccccatacctcttaaacaaatcgcaaaagtgcaaaatggagttctgctccctgcaaga
ggagtcaatttgcgacaaaatgcctctcagaaacttggccagctgaaaaagtttaccagc
aatgaatcagacgctaagatgaagctgaactctcataataagaagaaatctctgtgggtg
caccgaggcaagcctgtggggaggaaagcttcacaagaagggctggaggttttcaattgc
cctcactgtagcagggagttcacctaccctgccagcctgaagaaacatatggctatcagc
tgccccttaagacctgtctgcaggaaactcaaaaaaagaaaagcaagcatggcactagcc
caggaaaacaacgggcgctttcgtccacgtgtagcggaagtcatcatgaaatcgcaaaga
ttgaaccaaggtcagaaaaccattgcaaaaatacaaaccaaagagtctggttcagccaaa
ttcaccagtctaccagttaaaactcacattggcaagggaaaaattacagtgcataatttt
aggcctaaaagatctgacgttctgtccggctcagcagttcacttgggtaagaaaagtaaa
ctcattctaatggaagccattcagtcaccactggcatcaaataagtatccaacaacgata
agaaaactacagcaactgagcaacagggtacaaggagttgggagggaaataaagcaggat
gaggtggagatgagagaaagaactgcaggtcccgttactcgaagtctgcagcaggctaat
ggcacattaaacaatacacccaacaacactaataaaaggactaaccatggaggcatgacg
gacaggcagaatggcactgcgaatcaaccaggtgtggacttgaagaagtcaaaagacaaa
ttgaattag
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integrated database retrieval system
