Trichomycterus rosablanca: 134318086
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Entry
134318086 CDS
T09921
Symbol
rorca
Name
(RefSeq) RAR-related orphan receptor C a
KO
K08533
RAR-related orphan receptor beta
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134318086 (rorca)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
trn03310
]
134318086 (rorca)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134318086 (rorca)
Nuclear receptors [BR:
trn03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
134318086 (rorca)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
134318086
NCBI-ProteinID:
XP_062854906
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Position
7:2204477..2241650
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AA seq
458 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNSMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQAQDHVVSVAPSSRGEEPG
ENSQDGHTRTCSRGSSAVLSDLDDIGGLLFDLPLTHEDEYCGLELLGVPGAIGEGSGTEG
NSCSRGVTGLKHEHHSHSPLGDVLSLPETERMAQNVLKSHVETSQYSTEELKRLTWSVYT
PEETRTYQNKPMEMMWQQCVVHLTNAIQYVVEFAKRITGFMELCQNDQIVLLKAGCLSVL
LIRMCRAYNPSNHTLLFDGKSANVQLFKALGCDDLVNAVYELAKSLSRLQLTEEETALFS
ATILFSPDLPWLTDRLQVQKLQEKVYQALNRCLNRGSSNEQKLNKMLAKLPVIKSICILH
IDKLEFFRVLHPETAYSFPPLYREVFVSDGTFPDSGGS
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgagggctcaaatagaagtgattccttgcaagatctgtggagataaatcctcggggatt
cattacggagtgatcacctgtgaaggatgcaagggattctttcgtcgtagtcagcaaaat
aactccatgtattcatgctcgcggcagaggaactgtctgatcgaccgtacaaacaggaac
cggtgccagcactgccgtctgcagaaatgcctcgcactcggcatgagccgcgacgctgtg
aagttcggccgcatgtccaaaaagcagcgggacagcttgtacgctgaggtacagaagcac
cagcaggctcaggaccatgtggtcagcgtagcgccctccagcaggggtgaggaacccgga
gagaacagccaggacggacacactcggacctgcagccgcggctccagcgcggtcctcagc
gacctcgacgatatcggcggcctgctgttcgacctcccgctcacccacgaggacgagtac
tgcggcctggagctgctaggggtcccgggggccatcggtgaggggagcggcacggagggc
aactcgtgctcacgcggcgtgacgggattaaaacatgagcatcattcacactcaccgctc
ggcgatgtgctgtccctgcccgagacagagcgaatggctcagaatgttctgaagtcacat
gtggagacgagccaatacagtacagaggaactgaaacgcctcacgtggagcgtgtacaca
ccagaggagacacggacctaccagaacaaaccgatggaaatgatgtggcagcagtgtgtg
gttcacctcaccaacgccatccagtacgtggtggaatttgctaaacgcatcacaggattt
atggagctttgtcagaacgaccagatcgtccttctcaaagcaggttgtctgagtgtgttg
ttaattcggatgtgtcgagcctataaccccagtaaccacacgctgctgttcgacggcaag
tctgcgaatgttcagctcttcaaagctctgggttgtgatgatctggtgaatgctgtatat
gaactggccaagtcattaagtcgcttgcagcttacagaagaggaaacggctctgttcagc
gccaccatcctgttctctccggatctgccgtggcttacagaccggctgcaggttcaaaag
ctgcaggagaaagtttaccaggcgctgaaccgctgtctgaacagaggaagctccaacgag
cagaaactcaacaagatgctggctaagctgccggtgatcaagtccatctgcatcctgcac
atcgacaagctggaattcttccgtgttcttcaccctgaaacggcgtacagctttcctcca
ctctacagagaggtgttcgtgagcgacggcaccttccccgactccggcgggagctaa
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