Trichomycterus rosablanca: 134318116
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Entry
134318116 CDS
T09921
Symbol
cldn5a
Name
(RefSeq) claudin 5a
KO
K06087
claudin
Organism
trn
Trichomycterus rosablanca
Pathway
trn03272
Virion - Hepatitis viruses
trn04382
Cornified envelope formation
trn04514
Cell adhesion molecules
trn04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
134318116 (cldn5a)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134318116 (cldn5a)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
134318116 (cldn5a)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
134318116 (cldn5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
trn03037
]
134318116 (cldn5a)
04147 Exosome [BR:
trn04147
]
134318116 (cldn5a)
04515 Cell adhesion molecules [BR:
trn04515
]
134318116 (cldn5a)
Cilium and associated proteins [BR:
trn03037
]
Other cilia and associated proteins
Stereociliary proteins
134318116 (cldn5a)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
134318116 (cldn5a)
Exosomal proteins of colorectal cancer cells
134318116 (cldn5a)
Cell adhesion molecules [BR:
trn04515
]
Immunoglobulin superfamily
L1 family
134318116 (cldn5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
L_HMGIC_fpl
Motif
Other DBs
NCBI-GeneID:
134318116
NCBI-ProteinID:
XP_062854946
LinkDB
All DBs
Position
7:complement(4850747..4852072)
Genome browser
AA seq
216 aa
AA seq
DB search
MASAALELLGLTMAVLGTLLEMIACGLPTWKVTAYIEANIVVSQTIWDGLWMSCAVQSTG
QMQCKVHDSMLALGRDLQVARALTVVSSVVCVVALLAVIAGAQCTNCIRAERVKARVVNI
GGGLYLISALLVLVPLCWMASNIIADFYDPHVPTAKKREMGAALYIGWASAALLMLGGAL
LCCSCPPPSNNAGYSVNYAPTKRATTNGDYDKRNYV
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atggcttcggctgcattggagctgctgggcttgacgatggcagtgctcgggaccctgctg
gagatgatcgcctgcgggctgcccacatggaaagtgacggcgtacatcgaagccaacatc
gtggtttcgcagactatctgggacggtctgtggatgtcctgcgcagtccagagcacgggc
cagatgcagtgcaaggtgcacgactcgatgctggcgctcggccgcgacctacaggtggcg
cgggcgctgactgtggtctcgtcggtggtgtgcgtggtggcgctgttggcggtgatcgcc
ggcgcccagtgcaccaactgcatccgcgccgagcgcgtaaaagcccgggtggtaaacatc
ggcggcgggctttacctcatcagtgctttacttgtgctcgttcctctctgctggatggcc
agcaacatcatcgcagacttctacgacccgcatgtacccactgcgaagaagcgtgaaatg
ggcgctgcgctctacatcggctgggcatctgcggcactcctcatgctgggaggcgcgttg
ctctgttgttcctgccctccaccatcaaacaacgctggatactcggtcaactacgcaccc
accaaacgagccacgacgaacggagactatgacaagcggaactatgtgtaa
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