Trichomycterus rosablanca: 134318135
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Entry
134318135 CDS
T09921
Symbol
fem1c
Name
(RefSeq) protein fem-1 homolog C
KO
K25805
protein fem-1 homolog A/C
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134318135 (fem1c)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
134318135 (fem1c)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
Ank_3
Ank_5
Ank_KRIT1
ANK_LRRK2
TPR_12
TPR_NPHP3
TPR_10
TPR_2
Motif
Other DBs
NCBI-GeneID:
134318135
NCBI-ProteinID:
XP_062854983
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All DBs
Position
7:6880177..6890367
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AA seq
617 aa
AA seq
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MDLKTAVFNAARDGKLKLLQKLLENKTDHDVTKLMSEKTNGATPLLMAARYGHLELVEYL
LECCCAPVEIGGSVNFDGETIEGAPPLWAASAAGHLKVVQSLLGHGASVNNTTLTNSTPL
RAACFDGHLDIVRYLVEHKADLEVANRHGHTCLMISCYKGHKEIAQYLLERGADVNRKSV
KGNTALHDCAESGSLEIMKMLLKYGATMEKDGYSMTPLLSASVTGHTNIVDFLTQHPQTN
KTERINALELLGATFVDKKRDLLGALKYWKRAMEMRYSDGNSTFLKGEAKELIMAYDYAK
EARSIEELDSLISDPDEMRMQALLIRERILGPSHPDTSYYIRYRGAVYADSGNFERCINL
WKYALDMQQNNLDPLSPMTASSLLSFAELFSFMLQDRAKGLLGTSVSFGDLMGILSKSVL
EIERAVKQRHPRPDPAQLSKALAIILHLICLLEKVPCTVEQDHFKKETIYKFLKLQPCGK
NGYSPLHLAVDRNTTCVGRYPVCKFPSFQVTSILLECGADVNCRDEDNNSPLHVAASNNH
PDIMKLLIAGGTHFDSTNSFRQTACDLLDEKEMAKNLIQPINHTTLQCLAARTIIKYDLA
YRGNIPEKLEAFVLLHR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaaactgcagtattcaacgcagcccgagatggcaaactcaaactgcttcaa
aaacttttggaaaacaaaacggaccacgatgttacaaaactgatgtccgaaaagacaaat
ggagccacgccgctgttgatggcagcgcgctacgggcacctggagttggttgagtacctg
ctggaatgttgctgtgcaccggttgaaatcggaggctctgtcaattttgatggcgagacc
attgaaggagcccctccactgtgggccgcatcggccgcggggcatctgaaggtagtgcag
tctctgctgggccatggtgcttctgtaaacaacaccacactgactaactccacccctcta
agagctgcttgctttgatggccaccttgacattgtcaggtatctggtggagcacaaagcc
gacctggaagtggccaatcggcatggccacacgtgcctcatgatttcttgttataaaggc
cataaggaaattgcacagtatctgctggaacgaggtgcagacgttaacaggaaaagtgtc
aaaggtaacacagctttacatgattgtgcggagtccggaagtttggagattatgaaaatg
cttctcaagtacggcgccactatggaaaaggatggctacagcatgacccccttactctca
gctagtgtcaccggtcatacgaacatagtcgacttcctcactcaacatccacagacgaac
aaaacggaacggattaacgcgctggaactacttggtgctacttttgtggacaaaaagaga
gatcttctgggagctctgaaatactggaagagggccatggagatgcgctatagtgatggc
aacagcacttttttaaaaggagaagctaaagaactcataatggcttatgactatgccaag
gaggccaggagcatagaagagctggacagtctgatctcagaccctgatgagatgcgaatg
caagctcttttgattagagaacgtatcttgggcccatcgcaccccgacacgtcgtactac
attcgttacagaggagccgtttatgctgattcggggaatttcgaacgctgtataaacctg
tggaagtacgccttggacatgcagcagaacaacctggacccacttagtcccatgactgca
agcagcttgctgtcatttgccgagctcttctcttttatgttgcaggaccgtgctaagggt
ctgctgggcacctctgtgtccttcggcgacctcatgggcatcctgagcaagagcgtacta
gaaatcgaacgtgctgtgaagcagcggcaccccagacccgacccggctcagctcagcaaa
gctctggcgattatcttgcaccttatttgcttgctggagaaagttccttgcaccgtcgag
caggatcactttaaaaaagaaaccatttataagttcctcaagctgcagccatgtgggaaa
aacggttacagtcctctccacctggctgtagacaggaacaccacgtgcgtcggtcgctac
cccgtctgcaagttcccctcgttccaagtgacctctattctgctggagtgcggtgccgac
gtgaactgtcgcgacgaagataacaacagtccgctgcacgtcgccgcctccaacaaccac
ccagacatcatgaagctgctgatcgcaggcggcacgcactttgacagcactaattcattc
aggcagaccgcatgtgacctgctggacgagaaagaaatggccaagaacttgattcagccc
atcaatcacaccactctgcagtgcttggccgctcgcactattatcaaatatgatctggcg
tatagaggaaatattccagagaagcttgaggcctttgttctactgcacagataa
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