Trichomycterus rosablanca: 134318147
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Entry
134318147 CDS
T09921
Symbol
apex2
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase 2
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
trn03400
]
134318147 (apex2)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
134318147 (apex2)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
134318147 (apex2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
134318147
NCBI-ProteinID:
XP_062855000
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Position
7:complement(8736225..8744640)
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AA seq
569 aa
AA seq
DB search
MKIVTWNINGIRTFKHGIKKTLDSFNADIICVQETKVTRDLLDERTAIVDGYNSYFSFSR
GRTGYSGVATFCKESATPFAAEEGLSGRLGNHGEAVGFYGDQGEFTSEELQALDSEGRAV
ITQHKITRAEKSETLTVINVYCPRADPEKPERKHFKLQFYKLLQSRAEAILGSQSHVIIL
GDINTSHRPIDHCDPDDVDNFEDNPGRKWLDGLLYESPEVRDSEESLNCVSGGQFVDIFR
QFHPIRTNAFTCWSSRTGARQTNYGTRIDYIFGNRSLAEKSFLNADIMPEVEGSDHCPMW
AQLSCSLKPSPKCPSLCTRYMPEFTGKQQKLLRFLVKVPEQKCISSDTEKPLPGSQENGK
IRENLRPPPSGVSSGKRPANGIPESSNFKGKKSKHDKKTAPKPQGSLLNFFKPKLSHVAS
SSQGSTEFTENGLESKDSMSEFHKVAQNTFTDCTSTPTILTESYTEVKSETNNLNIKNEI
KMGQDQTPSNATPHQQTTKGSCPDFWKSVLHGPPQPPLCKGHNEPCVLRTVKKAGPNMGR
QFFVCSRPEGHASNPDARCNFFVWVDKRK
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgaagattgtgacttggaatataaacggtatcaggacttttaaacatgggattaagaag
acgctggactcgtttaatgctgatataatttgcgtccaggaaaccaaggttacccgagac
ctgctagatgaaaggactgccattgtggatggatataactcctactttagcttcagtcga
ggacgcacgggctactcaggggttgcaactttttgtaaagagtctgctaccccattcgct
gctgaagaaggattgtccggtcgcctgggtaatcatggagaggctgttggtttctatggt
gaccagggggaatttaccagtgaggaactgcaggcgctggacagtgaaggaagagctgtt
atcactcaacacaagatcaccagagcagaaaagtcagagacgctgactgtcattaatgtg
tactgcccacgtgctgatccagagaagcctgaaagaaaacacttcaagcttcagttctac
aaactcctccagagtagagctgaggcgattttggggtctcaaagtcatgtcattattttg
ggggatatcaacacctctcataggcccatagaccactgtgacccagacgatgtggacaac
tttgaggacaatccaggtcgaaaatggttagacggcctcctgtatgaatcgcctgaagta
cgggattctgaagaatccctaaactgtgtgtctggtggtcaatttgttgacatctttcgc
caattccatccaatacgtaccaacgccttcacatgctggtcttcccgtacaggtgccagg
cagaccaactatggcacgcgcatcgactacatctttggcaatcgctcgctagcagagaaa
agctttctcaatgcagatatcatgccagaggtagaaggttctgatcactgccccatgtgg
gcacaactaagctgttcccttaaacccagtcctaagtgcccatctctgtgtacccgttac
atgccagagttcactggaaagcagcagaaactcctgcgcttccttgtcaaagttcctgag
cagaaatgcatttccagtgacactgaaaaacctttgcctggttcccaagagaatgggaaa
attcgtgagaacctcaggcctccaccatcaggtgtcagttctggaaagagacctgctaat
gggattcccgagtcatccaactttaaggggaaaaaaagtaaacatgataaaaaaacagca
cctaaacctcagggcagccttctaaacttcttcaaacctaaactgagtcatgtggcgtcc
tcaagtcagggctcaactgagttcactgagaatggtttggagagtaaagattccatgtca
gagtttcacaaagttgcacaaaatactttcactgactgcacctctacccctaccatcctt
acagagagttacactgaggttaaaagtgaaacaaataacttaaatattaagaatgaaata
aagatgggtcaggatcagaccccaagcaatgccaccccacatcaacagactaccaaagga
tcttgtcctgatttctggaagtcagttttgcatggtccaccccaaccaccactatgtaag
ggacacaatgagccttgtgtgctgcggactgtgaagaaagccgggcctaatatgggtcga
cagttctttgtatgttcccggcctgagggccatgcgtcaaatccagatgcaaggtgcaat
ttctttgtctgggttgataaacgcaagtaa
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