Trichomycterus rosablanca: 134318175
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Entry
134318175 CDS
T09921
Symbol
sort1b
Name
(RefSeq) sortilin 1b
KO
K12388
sortilin
Organism
trn
Trichomycterus rosablanca
Pathway
trn04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
134318175 (sort1b)
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Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
BNR_6
BNR
Motif
Other DBs
NCBI-GeneID:
134318175
NCBI-ProteinID:
XP_062855045
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Position
7:complement(11063917..11091729)
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AA seq
811 aa
AA seq
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MERRWLFIFVVFLPVVLSLDFDGVRVSRSAQSVHMKAEGLLGSVLDHHHSIKKRSTDAGA
DTCNALQGYEEKLTSNTHDYVFNDLSGSVAIAWIGDGTGVLLALTTFQVPLFLLKFGQSK
LYRSEDYGKTFEDITELINNTFISTEFGIAIGPENSGKVILTGDMSGSSGSKIFLSSNFG
KSFSQSELPFHSRMQIVYNPVNPDVLMAISIKNELWLSEDFGGKWRNIHDTVCVVKWGTA
NTIFFSTNLNGSCFDRGDLVLMKTLDYGVTFKQIAEKIFSFGIGGRFLFASVMTGTGMMR
MIHVSMDQGEEWNMAQLPAVGHEQFYSILGANDEMVFMHVDEPGDTGFGTIYVSDDRGMV
YSKSLERHLYTATRGDNDFTNVTSLRGVFMTSILAEDNSVQTVVSFDQGGEWVPLKKPEN
SKCDSTSKDKNSCSLHIHASYSMSVKMNVPVLPLSEPNAVGLVIAHGSVGDTISILTPDV
YVSDDGGYTWMRALEGPHHYAILDSGGLLVAVEHNPNIPIAQVKFSTDEGQCWHVYNFTQ
EPIYFTGLAWEPGARSMNISIWGYRDSVLVQNWVSVTIDFRELLTRDCGDNDYVQWLAHS
DDISDPDDGCILGYKEHFLRLKKDSVCWNGRDYEVNKQPMPCACTLDDYLCDFGYYRKEN
SSECLEQAELKGHDLEFCIHGKKEHLQTNGYRKIPGDKCERGVTLERKVTDMSKKCISNL
LDPQLQKQEPSSNTALIVLVVTAVIAIVCVAGVLIVKKYVCGGRFLVHRYSVLQHNAEAN
GIEGVDDPLDTSVVGQPKPSFHDDSDEDLLE
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atggagcgacggtggctttttatttttgttgtatttctacctgtggtactgagtctggat
tttgacggagtccgggtgtctcgtagtgcgcagtcggttcacatgaaggcggaaggtctg
ctcgggtcagtgctggatcatcatcacagcattaagaagagaagcactgatgcaggagcg
gatacctgtaatgctctacaggggtacgaggagaaactaaccagcaacactcacgattac
gttttcaatgatctaagtgggtcagtggctatcgcctggataggagatggaacaggggtt
ttgctggcattgactacatttcaagtaccattatttttgttaaaatttggccagtccaaa
ctttataggagtgaggactatgggaagacatttgaggacatcacagagcttatcaataac
acctttatcagtactgagtttgggatcgccatcggtcctgagaattctggaaaggtgatc
ctaacaggtgatatgtctggaagcagtggttccaagatttttctctcctcaaactttggg
aaatctttttcacagtcagagctgcccttccactcccgcatgcagatagtgtataaccct
gtaaaccctgacgtactcatggctattagcattaagaatgaactctggctttcggaagat
tttggagggaagtggaggaacatccatgacactgtgtgtgtggtgaagtggggaacggcc
aacacgatcttcttttctaccaacctaaatggatcctgctttgaccgaggggatctggtc
ctaatgaagacgttggactatggtgtcacattcaagcaaatcgctgaaaagatcttctcg
tttggcattggtggacgtttcttgtttgcctcggtcatgaccggaacaggtatgatgaga
atgatccacgtgtccatggatcagggggaggagtggaacatggcccagcttcctgcagta
ggccatgagcagttctattctatactgggagccaatgatgagatggtgtttatgcatgtg
gatgaacctggagacactgggtttggtaccatctatgtatcagatgatcgaggcatggta
tactccaaatctctggaacgccacctctacactgctacaagaggggataatgacttcacc
aatgttacctcactcagaggagtcttcatgaccagcatcctagctgaggacaactctgtg
cagactgtggtgtcattcgatcagggaggagagtgggttcctctgaagaaaccagagaac
agcaagtgtgattcaacctctaaagataaaaactcatgtagtcttcatattcatgcttcc
tacagcatgtctgtaaagatgaatgtgccggtgctgcctctgagtgaacccaatgctgta
ggactggttattgctcatggcagcgtgggtgacactatttcgatactgaccccggacgtg
tatgtgtctgatgacggtgggtacacatggatgcgggctcttgaaggcccccatcactat
gccatcctggattcggggggcttacttgtggctgtggagcataaccccaacatacctatt
gctcaggtcaagttttctacagacgagggtcagtgctggcatgtgtacaacttcactcag
gagccaatctactttactgggcttgcctgggagccaggggcacgttccatgaacattagc
atctggggctacagagattcagttttagtccaaaactgggtttctgtcacaattgatttc
agagagctgctcactcgtgactgtggtgataacgactatgtgcagtggctggcacattcc
gatgacatcagtgaccctgatgatggctgcattttgggttataaggagcattttctgcgg
ctcaagaaggactccgtgtgctggaatgggcgtgattatgaggtcaacaagcagcccatg
ccgtgcgcctgcacactggatgattacctgtgtgactttggatattaccgtaaggagaac
agctcagagtgtttggaacaggctgagctcaaaggccatgatttggagttctgcatccat
ggcaagaaagaacatctacagaccaacggctatcggaagattccaggagataagtgtgag
cgaggagtaaccttagagagaaaagttactgacatgagcaaaaaatgtatcagcaatcta
ctggacccacaactgcagaaacaggagccatcttcgaacacagcccttattgttctggtg
gtcacagctgttattgcgatcgtctgtgtagccggggttctaattgtgaagaagtacgtc
tgtggtggaaggttccttgtgcacagatactcagttctgcagcacaatgcagaggctaat
ggtatagaaggagtggacgatcctttggacacaagtgtggtcggacaaccaaagcccagc
ttccatgacgactcagatgaggaccttctggaataa
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